Nicotiana tabacum (common tobacco): 107811301
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Entry
107811301 CDS
T04643
Name
(RefSeq) WD repeat-containing protein 82-B-like
KO
K14962
COMPASS component SWD2
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107811301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107811301
03036 Chromosome and associated proteins [BR:
nta03036
]
107811301
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107811301
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
107811301
COMPASS/SET1 complex (yeast)
107811301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
KNTC1_N
Beta-prop_DCAF4
Beta-prop_Nup120_160
Cytochrom_D1
VPS11_N
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
BBS2_Mid
Motif
Other DBs
NCBI-GeneID:
107811301
NCBI-ProteinID:
XP_016491687
UniProt:
A0A1S4BSB6
LinkDB
All DBs
Position
Un
AA seq
332 aa
AA seq
DB search
MAGGQPEREDKVSLEITEEILQSMEVGMTFRDYSGRISSMDFHKTSNYLVTASDDESIRL
YDVANATCLKTINSKKYGVDLVSFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH
RDRVVSLSLCSRKEYFLSGSLDRSVLLWDQRADKCQGLLRVQGRPATAIDEQGLVFAIAF
GGYIRMFDARNYEKGPFEIFSVGGDLSDANIVKFSNDGRLMLLTTTDGHIHVLDSFRGTL
LSTYNVQPVSSSSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTDTEPPMIK
WAPGSLMFVTGSSELSFWIPDLSKLGAYVGRK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtggacaacctgagagagaagacaaggtctcactagagatcactgaagaaatc
ttacagagtatggaagtcggcatgacgtttcgcgactatagtggtaggatcagttcaatg
gattttcataaaacatcaaattatctggtgacggccagtgatgatgagtccattcgtcta
tatgatgttgcaaatgcaacatgtttgaagactattaacagcaaaaagtacggggttgat
cttgttagcttcacttcccatcctacaactgttatatactcttccaagaatggttgggat
gaatctctacggcttctttcattgcatgacaacaagtacttgcggtatttcaagggtcat
cgtgacagggttgtgtctcttagcttatgctctaggaaggagtattttctctctggctcg
ctcgatcgatctgttctactttgggatcaaagagctgataaatgccagggccttcttcga
gtgcaaggaagaccagctactgcaattgatgagcaaggacttgtatttgctattgctttt
ggaggatatataaggatgtttgatgcacgcaattatgaaaaggggccttttgaaattttc
tctgttggtggagatttgtctgatgctaacatcgttaagttcagtaatgatgggagactt
atgcttttgacaactacggatgggcatattcatgtgcttgattcttttcgtggcacacta
ttatcaacatataatgtgcagcctgtttcaagtagttcaacattagaggcatctttcagc
ccagaaggaatgtttgttatatcaggatcaggtgatggtagtgtgtatgcttggagtgtc
cggagtggcaaagaggtagccagttggatgagtacagatactgagccacctatgatcaag
tgggctccaggaagcttaatgtttgtgactggttcttctgagctttcattttggatccca
gacttatcgaaattgggagcttatgtgggaagaaaatag
DBGET
integrated database retrieval system
