Nicotiana tabacum (common tobacco): 107811573
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Entry
107811573 CDS
T04643
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107811573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nta04121
]
107811573
Ubiquitin system [BR:
nta04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107811573
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
F-box
DUF4239
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
107811573
NCBI-ProteinID:
XP_016492017
UniProt:
A0A1S4BT10
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Position
Un
AA seq
585 aa
AA seq
DB search
MASSSFPEQVLKHLFSFLTSDKDRNSISLVCKSWYEIERRCRRKVFIGNCYAVSPEIMIR
RFPTEVRSVKLKGKPHFADFNLVPEGWGAHVQPWIAAMSGTYTMLEEIRLKRMVVSDESL
ELISTSFEHFKVLVLLSCEGFTTDGLAAIAANCRKLRELDLGESEVEDLSSDWLSYFSDS
CTSLVSLNISCLGSEVSFSDLERLIARSPNLRTLRLNHSVPLEKLPNLLLGASQLVEFGT
GAFSSEVQSDIFSNLEEAFSGCKRLKGLSGFWDVVPAYLPAIYPVCSGLTSLNLSYATIQ
NPDLSKLISQCHNLQRLWVLDYIEDTGLQMLAASCKDLQELRVFPSDPFAPEPVVLLTEQ
GLVAVSDGCPKLQSVLYFCRQMTNAALVTIARNRTNMTRFRLCIIEPRTPDYLTLEPLDV
GFGAIVEECKELRRLSLSGLLTDRVFECIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCES
LRKLEIRDCPFGDEALLANAAKLEKMRSLWMSSCSVSFGACKLLGQKLPKLNVEVIDERG
PSDTRPDSFPVDKLYIYRTVAGPRLDRPDYVWTMNDDAALRSTEP
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcatcatttccagaacaagtgttaaagcacctgttctcgttcttaacctcc
gacaaggaccggaacagtatatccttagtgtgcaaatcatggtatgagattgagaggcgg
tgcaggaggaaagtattcataggaaactgctacgccgttagccctgagattatgatcaga
cggttccctactgaagttagatccgtgaagctgaaaggaaagccacattttgcggacttt
aacctagtacctgaaggttggggcgcgcatgtacaaccttggattgctgcaatgtcgggg
acttatactatgcttgaggagattagactgaagcgaatggttgtcagtgatgagtctttg
gagttgatttctacttcgtttgagcattttaaggtattggtgttgttatcttgtgaaggg
tttactactgatggacttgctgctattgctgctaactgcaggaaactgagagaactggac
ttgggagaaagtgaagtggaggacctaagtagcgattggctcagttatttttctgatagc
tgtacttcactggtttcacttaacatttcttgtttgggttctgaggtcagcttctcagat
ctggagcgtctgattgctcgctctcctaatttgaggactcttcggctcaatcattctgtt
ccccttgagaagcttcctaacctacttcttggcgcttcccagttggttgaatttggtaca
ggtgccttctcttctgaggtacagtctgatattttctcaaacctggaagaagctttttca
ggctgcaagagacttaaaggcttgtctggattttgggatgtcgtgccagcttaccttcca
gctatatatccagtttgctccggactcacctctttgaatttaagctatgctactattcaa
aaccctgatcttagcaagctcataagtcagtgtcacaatttgcagagattgtgggtacta
gactacattgaagatactggtctccagatgcttgccgcttcctgtaaggaccttcaagaa
cttagggtgtttccttctgatccctttgctccagaaccagttgttttacttacagagcaa
ggccttgtggctgtctcagatggctgccctaagctccagtcggttttatacttctgccgc
caaatgacaaatgccgctttggttactattgcaagaaaccgtactaacatgactcgtttc
cgcttgtgtattattgaacctcgaactcctgattacttgactcttgaaccgcttgatgtt
ggttttggggcaattgtggaagaatgcaaagagttgcggcgactttctctttctgggctc
cttactgaccgtgtgtttgagtgcattggaacccatgctaaaaagttagagatgctttcc
attgcttttgctggggatagtgatctgggcctccaccatgttctatctggttgcgagagc
ctcagaaaactagagatcagagactgcccatttggcgatgaggctcttttggctaatgct
gcaaagctggagaagatgcgttccctttggatgtcttcttgttcagtaagttttggagcc
tgtaagctgctaggccagaagctgcctaagcttaatgttgaagttatagatgagaggggt
ccctcagatacgcggccagatagcttccctgttgataaactttacatataccgaacagtg
gctggaccaaggcttgacaggcctgattatgtttggacaatgaatgatgatgctgcactg
aggagtactgagccataa
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