KEGG   Nicotiana tabacum (common tobacco): 107811627
Entry
107811627         CDS       T04643                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107811627
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107811627
   03041 Spliceosome [BR:nta03041]
    107811627
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107811627
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107811627
Spliceosome [BR:nta03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    107811627
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 107811627
NCBI-ProteinID: XP_016492078
UniProt: A0A1S4BT67
LinkDB
Position
Un
AA seq 420 aa
MDLTKKRKADENGGAYPVSNELVTAAAPPALGVLSPEDIDRILEPFTKDQCISILRNASL
RYPDILEAVRSIADADVSQRKLFVRGLGWETTTDKLKQVFSAYGELDEAIVITDKASQKS
KGYGFVTFKHVDASILALKEPNKKIDGRITVTQLAAAGNSGNSQSADVALRKIYVGNVPF
EITSEKLLNHFSMYGEIEEGPLGFDKQTGKAKGFAFFVYKTEEGARASLVDPVKTIDGHQ
VLCKLATDNKKGKPQHNMGPGGMPNTGHPTGMPGDDRVGSIPGSNYGVPVSGLGPYPGYS
GGPGPGMQQPPPQPGMVAHQNPHPVGPGYGNQGPGSFTGSAGGYAGAGGYGGGAGDYSGG
LGNAGYRIPQSSAGMPSSGGYPDGGSYGLQSGYPSQVPQPGGAVARVPPGGMYQGMPPYY
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggatctaacgaagaaacgcaaggctgatgagaacggcggtgcttatcctgtatctaac
gaactcgttaccgccgccgctcctccggcactcggcgttctctcccctgaagacatcgac
agaattcttgaaccgttcacgaaagaccagtgtatctcaatcctccgcaacgcctccctt
cgttaccccgatatcctcgaagctgttcgttccatcgccgatgccgatgtctctcagcgc
aagcttttcgtccgtggtcttggttgggagaccaccaccgacaagctcaaacaggttttt
tctgcatacggagaactcgacgaggccatagttataaccgacaaggcctcgcagaaatca
aaaggctatggttttgtaactttcaagcatgtggatgcgtcgattcttgctttaaaggag
cccaacaagaaaattgatggccgtattacggtgacacagctggcagctgcaggtaattcg
gggaattcacagtcggctgatgtggcgcttaggaagatctatgttggtaatgttccattt
gagattacgtctgaaaagcttttgaatcacttttccatgtacggagagattgaagagggg
cctttgggatttgataaacagactggaaaggcaaaaggctttgcgttttttgtgtacaag
actgaggaaggagcaagggcgtctttagttgatcctgtgaagacgattgatggacatcag
gtgttgtgcaaattggcgacggataataagaaggggaagccccagcataatatggggcct
ggtggaatgcccaatactggacatcctacaggaatgcctggtgatgatagggttggatcg
attcctggttctaattatggtgttcctgtaagcgggttgggtccgtatcctgggtattca
ggtgggcctggtccaggaatgcagcagccaccgcctcagcctggaatggtggcacatcag
aatccacatcctgttggacctggatatggaaaccagggaccgggttcttttactggcagt
gctggtggatatgctggcgctggtggctatggtggtggtgcaggggattacagtggtgga
cttggaaatgctggttacaggattccacaaagctctgctggaatgcctagttcaggaggt
tatccagatggtggtagttatggattacagtcgggttatccctcacaggtaccacaacca
ggtggagcagtggccagggttccaccaggtgggatgtaccagggcatgcccccatactac
tga

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