Nicotiana tabacum (common tobacco): 107811764
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Entry
107811764 CDS
T04643
Name
(RefSeq) protein PAT1 homolog 2
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107811764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107811764
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107811764
mRNA degradation factors
5'-3' decay
Decapping complex
107811764
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GFIT
Other DBs
NCBI-GeneID:
107811764
NCBI-ProteinID:
XP_016492243
UniProt:
A0A1S4BTU1
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Position
2:complement(121020529..121029410)
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AA seq
814 aa
AA seq
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MEKFDSNDFSNLASSSSSVSEGALFDASQYAFFGEEVELRGLEEDGNNGVPLLGGGFGDD
ELPEYHLFEKDEGSALGSLSDLDDLATTFSKLNRNVTGPRHPGVIGDRGSGSFSRESSSA
AEWTKESDFPDWFDQNLSDSECYQESKRWSSQPHLSAVHLAESKPLYRTSSYPQQPQQLQ
HFLSEPILVPKSSFSSFPPPGGQSQQSSPCSHLRPQNISSLAAGPQSPYFTANLSSLSNS
NMHLAGLPHGLHYGGNMSQLNTIGLSLNNRLQNQWTSHAGLIHGDHSSLLNSILPHQFPH
QNGLLSPQIMSPLQQQRLHLAVQPSLGHFSALQSQLFNSYPSPSHLSKYGLADFRNPRSK
SSHKGRQSEYSSKQVTDGSNHKRESNVSQFRSKYMTGDEIESILKMQHSATHRNDPYVDD
YYHQARLAKKAAESRSMRRFCPNKEQSSRSRNSTETQPHLHVDAQGRVSFSSIRRPRALL
ESDPPGLVSNDGSGEQKISEKPLEQEPTFAARITVEDGFYLLLEVDDIDRLLLFTQPQDG
GAQLRRKRQILLEGMATSLQLVDPLGKSGSSVGLTPKDDIVFLWLVSLPKGRKLISRYLQ
LLIPGGELARIVCMAIFRHLRVLFGGLPHDVEAAETITNLAKTVSACVSGMDLNSLSACL
AAIVCSSEQPPLRPLGSPAGDGATVILKSVLDRATYLLTDPQAGGSFSMPNPALWQASFD
AFFGLLTKYCLSKYDSIMQSILAQTPSNTEMIGSEAARAVSREMPVELLRAGLPHTNEQQ
RKLLFNFAQRSMPVTGFNAHGGNSGQINPESVSC
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggagaaattcgatagcaatgatttcagcaacttggctagctcctccagctctgtatca
gagggtgcgctgtttgatgcatcacagtatgccttttttggggaagaagttgaattgagg
ggtttagaagaggatggaaataatggtgttcctttgttgggaggtggatttggtgatgat
gagttaccggaataccatttgtttgagaaagatgagggatcagctttggggtctttatct
gacttagatgatctagcaactacattttcaaagttgaacagaaatgtcactgggcctagg
catcctggagttattggcgaccgtggatcaggatctttttccagggaaagttcatctgca
gctgaatggacaaaggagtcagattttcctgattggtttgatcagaatttgtctgacagt
gaatgttaccaggaaagcaaaagatggtcttcacagccacatctctctgctgtgcatctt
gcagagtcaaaaccattgtatagaacatcctcataccctcagcaaccccaacaacttcag
cacttcttaagtgaacccattttagtaccgaagtcatcgttcagttcttttcctcctcca
ggtggccagtctcaacaatcctcaccttgcagtcatttacgtccgcaaaacatatcatct
cttgccgctggacctcagtctccctatttcactgctaatctctcttctttgtcaaactct
aatatgcatttggcaggcttgcctcatgggctccattatggtggaaacatgtcacagttg
aacaccattggcctttcacttaataaccggctgcaaaatcagtggaccagccatgcagga
ctcatccatggggaccattctagtctcttaaacagtatcttaccacatcagtttcctcat
caaaacgggctattatcccctcagataatgtcccctctgcagcagcagagactgcatctt
gcagtccagccatctttaggtcatttttcagcactacaatctcaattatttaattcctac
ccttcaccatcgcatctgagcaaatatggattggcggatttcagaaatccaagatctaag
tcatcacataaaggtagacagagtgagtattcatccaaacaagttactgacggtagtaac
cacaaacgggagagtaatgtgtcacagttcagatctaagtacatgactggtgatgaaata
gagagcattctgaaaatgcagcattctgcaacacatcggaatgatccatatgtagacgat
tattatcaccaagctcggcttgcaaagaaagcagctgagtcaagatcaatgcgccggttc
tgtccaaacaaggagcaatcttcacggtcgcgcaatagcacagaaacgcagcctcatctc
catgttgatgctcaggggcgggtttcattttcttctatccgcaggcctcgtgctcttctt
gaatctgatccaccaggccttgtttctaatgatggcagtggtgaacagaagatatctgag
aaacctttggagcaggaaccaacatttgcagctagaattaccgtagaagatggtttctat
cttctgcttgaggtcgatgacattgaccggctacttctgtttactcagccccaggatggt
ggtgctcaactcaggcggaaacggcaaatcctgttagaaggcatggcgacctcgcttcag
cttgttgacccccttggaaaaagtggcagttctgtagggcttacccctaaagatgacatt
gtatttttatggttggtatctcttcctaaaggccgaaagctcatatcgaggtaccttcag
cttcttattcctggaggtgagcttgccagaatagtttgcatggcaatttttcgacattta
agggtcttgtttggtggccttccacatgatgtggaagccgcagagaccatcactaatctt
gcaaaaacagtctctgcatgcgtcagtggcatggacctcaattcgctcagtgcttgtcta
gctgctattgtttgttcgtcagagcagcctcctctccgcccacttggaagccctgctgga
gatggagccactgttattctaaagtctgtacttgatagggcaacttatctgttaacagat
cctcaggctggaggcagcttcagcatgcctaatcctgccctttggcaggcgtcttttgat
gccttctttggtctacttaccaagtattgtctgagtaagtatgacagtataatgcaatca
atacttgcacagactccgtcaaacacagagatgattggttcagaggctgcaagagctgta
agtagagaaatgcctgtcgagcttctacgtgcaggtcttccgcacacgaatgagcagcag
aggaagctgctgttcaattttgctcagcggtccatgcctgttactgggtttaatgctcat
ggtggaaatagtggacaaataaatcctgaatccgtaagctgctag
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