Nicotiana tabacum (common tobacco): 107811891
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Entry
107811891 CDS
T04643
Name
(RefSeq) spastin-like
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107811891
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nta04812
]
107811891
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
107811891
Membrane trafficking [BR:
nta04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
107811891
Cytoskeleton proteins [BR:
nta04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
107811891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
RuvB_N
AAA_22
AAA_16
AAA_14
TIP49
NPHP3_N
Vps4_C
Mg_chelatase
AAA_2
DUF815
MIT
AAA_25
RNA_helicase
MCM
nSTAND3
AAA_24
IstB_IS21
AAA_18
bpMoxR
AAA_7
AAA_17
FliT
AAA_28
AAA_33
ABC_tran
AAA_30
Guanylate_kin
AAA_SelU
PhoH
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
107811891
NCBI-ProteinID:
XP_016492370
UniProt:
A0A1S4BU21
LinkDB
All DBs
Position
Un
AA seq
508 aa
AA seq
DB search
MSFLKDLAETLSSIFSDTPSSSSPQNDRNLNSGDRMMDGVATGNERAAYKLKGYFDLAKE
EIDKAVRAEEWGLADDAISHYQNAQKILAEGISTPVPSYVTSSEQEKVKSYRQKLTKWKS
QVSERLQTLSRRAGGTSAVKISAPQTQRLAVSQSSSSARKGESRSAPSSGRDSSVMRVPS
SGKDSSVARVPSNSISSHKPSQESANGYDPKLVDMINSVIVDRSPSVKWEDIAGLEKAKQ
ALLEMVILPTKRKDLFTGLRRPARGLLLFGPPGTGKTMLAKAVASESEATFFNVSASSLT
SKWVGEGEKLVKTLFMVAISRKPSVIFMDEIDSIMSTRTTNENEASRRLKSEFLVQFDGV
TSNSDDLVIVIGATNKPQELDDAVLRRLVKRIYIPLPDANVRRQLLKHXKKKKKKKKKSF
VYWMIGGDLEPLVRDTEGYSGSDLQALCEEAAMMPIRELGANILRVNVDQVRGLRYGDFQ
KAMTVIRPSLQKSKWEELERWNQEFGAN
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgagttttctcaaagacctggctgaaaccctaagctcgatcttttcggacactccatca
tcgtcttcgcctcagaacgatcgtaacctaaactccggcgatcggatgatggacggcgtt
gccaccggcaacgaacgggcggcgtataagctgaaaggctactttgatttggccaaagaa
gagatcgacaaagccgttagggctgaagaatggggattggctgatgatgcaatttcacat
taccaaaatgctcagaaaatactcgccgaaggaatttctactccggttccttcgtatgtt
acttctagtgaacaagagaaagtgaaatcatatcgtcaaaagctaacaaagtggaagtct
caagtttcagagagacttcagactctaagtcgacgagcaggtggcacatctgcagtcaag
atttcagcacctcaaacccaaaggctggctgtttcacaatcaagttcatctgctcgaaaa
ggagaatctcgatctgcgcctagttctgggagagacagctctgttatgagggttcctagt
tccggaaaagacagctctgttgcgagggttcctagtaatagcatatcaagccacaaacct
tcacaggaatctgctaatgggtatgatccaaagttggttgacatgataaattctgtaatt
gtggatagaagcccctctgttaaatgggaagatattgcgggacttgaaaaggcaaagcaa
gctctcttagagatggtaattctaccaaccaaaagaaaggacctcttcactggcttaaga
aggcctgctagaggtctacttctttttggaccaccgggtactggaaaaaccatgcttgcc
aaagcagtagcttcagagtcggaggcaacatttttcaatgtgtctgcttcttcgctaaca
tcaaagtgggttggagagggtgaaaagcttgtcaagacacttttcatggttgccatttcc
aggaagccatctgtaattttcatggatgagatagatagtattatgtcaactaggactacc
aatgagaatgaagcaagcagaaggttgaaatcagagtttctagttcagtttgatggggtg
acatcaaattctgatgacctggtaattgtaattggtgccacgaataagccacaggagttg
gatgatgctgttctaaggagattggtcaaaagaatatatattcctttacctgatgctaat
gttagaagacaacttctgaaacacagnaaaaaaaaaaaaaaaaaaaaaaaaaaaagtttt
gtttattggatgataggtggagatctagaaccactagtgagagacacagaagggtattct
ggaagtgatcttcaagccttgtgcgaggaggctgcaatgatgccgatcagagagcttggt
gctaacattctcagagtcaatgtagatcaggtaaggggtttaagatatggagatttccaa
aaggccatgacagtgattaggcctagtctgcaaaagagcaagtgggaggaacttgaacgg
tggaaccaagagtttggtgcaaactaa
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integrated database retrieval system
