Nicotiana tabacum (common tobacco): 107812197
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Entry
107812197 CDS
T04643
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nta01009
]
107812197
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107812197
Enzymes [BR:
nta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
107812197
Protein phosphatases and associated proteins [BR:
nta01009
]
HAD phosphatases
Fcp/Scp phosphatases
107812197
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
107812197
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
107812197
NCBI-ProteinID:
XP_016492731
UniProt:
A0A1S4BV34
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All DBs
Position
3:complement(185174047..185183988)
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AA seq
965 aa
AA seq
DB search
MYKSVVVLYEGERVVGELELLYGGENGVVWGEKVIRISHYSPPSERCPPLAVLHTITSSS
TTGNGISFKLEPTKSKSLSQDSPLFLLHSTCLRDNKTAVVSLGREELHLVAMQSKNFGGQ
CPCFWGFKVASGLYNSCLTMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALLRKINSES
DPQRASAMLAEVKRYQEDKIFLKQYAENDQVIDNGKVIKSQSEVFPALSDNHQPIVRPLI
RLQDRNIILTRINPMIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEM
WRLLDPDSNLINSKELLDRIVCVKSGLRKSLFNVFQDGNCHPKMALVIDDRLKVWDEKDQ
PRVHVVPAFAPYFSPQAEGNNSVPVLCVARNVACNVRGGFFKDFDEGLLQRISEVAYEDD
IKQVPSAPDVSNYLISEDDPSAVNGSKDSLGFDGMADTEVERRLKEAMLASTSVPSQMTN
SDPRIAPALQYPVPPAISQSTIQAPVVPFPAQHLPQVTSVLKSSVTQLSPQDTSLQSSPA
REEGEVPESELDPDTRRRLLILQHGQDTRDQVSSEPQFPMGTPLQVSVPPRVQPHGWFPV
EEEMSPRQLNRALPPKEFPLNSESMHINKNRPPHPPFLPKMETSVPSDRVLFESQRLPKE
VIPRDDRMRFSQSQPSFHSMPGEEVSLGRSSSSSRDLDLEPGHYDPYLETPAGALQDIAF
KCGAKVEFKSGLLSSPELQFSVEVWFAGEKIGEGIGRTRREAQRQAAEESLMNLADKYLS
RLKPDPSSTAGDGFRFPNASDNGFVDDMSPFGYQSYLKEDRVSHSFASEPSRVLDPRLEV
LKKSVGSVASLRELCAIEGLGLAFQTQPQLSANPGKTEIYAQVEIDGQVFGKGIGSTWDD
AKAQAAERALVALKSELGQFSHKRQGSPRSLQQGFSNKRLRPEYSRGMQRLPSSGRFPKN
TSAMP
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatcggtggtggtattgtatgaaggagaaagagtggtgggagaactggaattg
ttgtatggtggtgaaaacggtgtcgtatggggagagaaggtaataaggatctctcactat
tcgccaccaagtgagaggtgtccaccactggcagtactacacacaattacttcatcatct
actactggaaatggaataagcttcaaattggaaccaacaaaatcaaagtcgctgtcccaa
gactcgccgctctttcttttgcactccacttgtctcagagataacaagactgcagtagtg
tcacttggaagagaggagcttcatttagttgccatgcagtctaagaattttggcggacag
tgtccttgcttttggggatttaaggttgcatcggggctttacaattcttgtttaacaatg
ctaaaccttagatgtcttggcattgtgtttgatcttgatgagacactcatagttgcgaat
acaatgcgttcatttgaggatagaatagaggccttgctacgaaaaataaattcagagtca
gatccgcagcgtgcctctgctatgctggctgaggtcaagcgttatcaggaggataagatt
tttttgaagcagtatgccgaaaatgatcaggttattgacaatggaaaggtgatcaaatct
cagtctgaggttttcccagcgttgtctgataatcaccaacctatcgtcagacccctgatt
aggttgcaagatagaaacattattcttactcgtattaatccaatgatccgcgatactagt
gttcttgtgagattgagacctgcttgggaggatctccgaagctatctgactgcaaggggt
cggaagcgctttgaagtttatgtatgcacaatggctgaaagagattatgctttagaaatg
tggaggcttcttgacccagattcaaacttgattaactcaaaagagctcttggatcgtatt
gtctgtgttaaatctggtttgaggaaatctttgttcaatgtattccaagatggaaattgt
catcctaagatggcattggtgattgatgatcgcttgaaagtgtgggatgagaaggatcaa
ccacgagtgcacgttgttcctgcatttgctccgtatttttcccctcaagctgaaggcaac
aattctgttcctgtcctttgtgttgccagaaatgtagcctgcaatgtcagaggtggtttt
ttcaaagatttcgatgagggcctattacaacgaatatctgaagttgcttatgaagatgac
attaagcaagttccttctgctccagatgttagcaactatttgatttcggaggatgatcct
tcggctgtaaatgggagtaaagattcacttggatttgatggcatggctgatactgaggtt
gaaaggagactaaaggaagcaatgttggcttcaaccagtgttccttctcaaatgacaaat
tcggatccaagaattgcaccagctctccagtatcccgtcccacctgctatttcacaatcg
acaattcaagcgccagtggtgccttttcctgctcagcatctccctcaagtcacttctgtt
cttaaatcatcagtgactcaattaagtcctcaggacacaagcttgcaaagttctcctgct
agggaagagggcgaggtaccagaatctgaactagatcctgatacaaggaggagactgctt
atattgcaacatggtcaagacacgagagaccaagtatcaagtgaaccacagtttcctatg
gggactccattacaagtgtctgtaccacctcgggtgcagccgcacggttggtttccagtg
gaggaagagatgagccctagacaacttaatcgagccttgcctcccaaggaatttccttta
aattcagagtctatgcatattaacaagaatcggcctcctcatccaccttttcttcccaaa
atggagacctctgtcccatctgatagagttctttttgaaagccagaggctgccaaaagag
gtaatccctcgggatgacaggatgagattttctcagtcacaacctagttttcattcaatg
ccaggcgaggaagtctccttgggtcggtcatcttccagcagcagggatcttgaccttgaa
cctggacattatgatccatatttagaaacacctgctggagctttacaggatattgcattc
aagtgtggagcaaaggtggaattcaagtcaggtttgctttcaagtccagaactgcagttt
tctgtggaggtgtggtttgctggagaaaaaattggagaaggaattggccggacgagaagg
gaagcacagcgtcaggctgctgaggaatctcttatgaatctggcagacaaatacttgtca
cgtctcaaacctgatcccagttccacagcaggggatggatttaggtttccaaatgcaagt
gataatgggtttgttgacgacatgagtccttttgggtatcaatcatatctcaaggaggat
cgtgtgtcacattcgtttgcatcagagccttccagagtgttggatccaaggctggaggtc
ttgaagaagtcagtgggttcagttgcctcccttagagaactgtgtgcgattgaaggactt
ggtttggcattccaaactcagcctcaactttcagctaatcctgggaaaactgaaatatat
gcccaggtggaaatagatggacaagtatttggcaagggaattggttcaacatgggatgat
gctaaagcacaggctgctgaaagggctctagttgctttgaagtcagagctgggtcaattt
tctcacaagcgtcagggttctccgagatcattgcagcagggattctccaataaaagattg
agacctgagtattctcggggtatgcagcgactaccatcttctggtagattcccaaagaac
acttctgctatgccatga
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