KEGG   Nicotiana tabacum (common tobacco): 107812893
Entry
107812893         CDS       T04643                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107812893
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nta03041]
    107812893
   03009 Ribosome biogenesis [BR:nta03009]
    107812893
Enzymes [BR:nta01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     107812893
Spliceosome [BR:nta03041]
 Complex A
  U1 snRNP components
   U1 related factors
    107812893
 Complex B
    107812893
Ribosome biogenesis [BR:nta03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    107812893
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 107812893
NCBI-ProteinID: XP_016493558
UniProt: A0A1S4BXI4
LinkDB
Position
Un
AA seq 501 aa
MSGYDSRPADPGSYRDRRSDSGFGGGSSYRSSSSSRKDYEGKDSPRKVDLDGLTPFEKNF
YVESPSIAAMTESEVEEYRRRREITVEGRDVPKPVKSFHDVGFPDYVIQEIEKAGFTEPT
PIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLVLAPTRE
LAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNNTN
LRRATYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLLNAY
KVVIGSADLKANHAIRQHVEIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQVTRQ
LRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINYDFPG
SLEDYVHRIGRTGRAGASGTAYTYFTAANARFAKDLINILEEAGQKVSPELAKMGRGAPP
PPGLGGFRDRGRGYGGNRQWS
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgagtggctatgatagccgtccggcggaccctggctcttaccgcgaccgtcgcagtgac
tcgggctttggtgggggctcgagttatagatcatcgtcatcgagcaggaaagattacgag
ggtaaggattcgccacggaaggtcgatttggatggattgactccattcgagaagaatttc
tatgttgaatcaccgtccatcgcggcaatgaccgaaagtgaggtggaagagtatagacga
cgccgggagatcactgttgagggccgtgacgtgcccaagcctgtaaagtcctttcatgac
gtaggatttccagattatgtcatccaagaaattgaaaaggctggcttcactgaacctaca
cctattcaagctcaaggttggcctatggccttgaagggccgtgatctcattggtatagca
gaaacagggtctgggaagacacttgcttatctgttgcccgcaattgtgcacgttaatgcc
cagccatttttagctcctggagatggtcctatcgtcttagtgttagccccaactcgtgaa
ctagctgttcagattcaacaagaagccactaaatttggtgcatcgtcacggattaagaat
acctgcatttatggtggggttccaaaggggccccaggttcgtgatcttcagaaaggtgtt
gaaattgttattgccacacctggaaggttgattgatatgctagaatctaataatacaaat
ttgcgaagggcgacatatctcgtgctggacgaggctgaccgcatgctagacatgggtttt
gaacctcaaatccgcaaaattgtttctcagatacgtccagatcgtcaaacgttgtattgg
agtgccacatggcccaaggaagttgagcagcttgcaaggcagttccttttaaacgcatac
aaagtggttattggttcagctgacctgaaagctaatcatgctattcgccagcatgtggaa
attgtctcggagagccagaagtataataaattagtaaagttgctggaagatattatggat
ggtagtcggattttaatattcatggataccaaaaaggggtgtgaccaagtaactcggcag
ctccggatggatggttggcctgcactttctattcatggtgataagagtcaggcagaaaga
gattgggtcctttcagaattcaaagctggaaagtctcctataatgacagctacagatgtt
gctgctcgaggtctagatgtgaaggatgtaaaatttgtaatcaactatgattttcctgga
tcgctggaggactatgttcatcgcattggtagaacgggaagggctggtgcatcagggaca
gcatacacctactttaccgcggcgaatgctaggttcgcgaaggaccttattaacattctt
gaggaggctggacagaaggtcagtcctgaactggcaaaaatgggacgtggtgctcctccc
cctccaggtcttgggggttttcgagaccgtggaaggggttatggaggcaataggcaatgg
agctaa

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