Nicotiana tabacum (common tobacco): 107813734
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Entry
107813734 CDS
T04643
Name
(RefSeq) LOW QUALITY PROTEIN: DNA excision repair protein CSB
KO
K10841
DNA excision repair protein ERCC-6
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
107813734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nta03036
]
107813734
03400 DNA repair and recombination proteins [BR:
nta03400
]
107813734
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107813734
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
107813734
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
107813734
NCBI-ProteinID:
XP_075093846
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Position
19:50643425..50651787
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AA seq
1212 aa
AA seq
DB search
MEEEEEDKILLSSLGVTSANPEDIEHDILEKATRHPGESNEATGSAEEEIVERKKGNEEG
QDKKLDLYNKLRAVEVEIDAIKSGFGHLERFRRHEEEVPDTDGRSEVKQTESEQSVIQAP
LDDSNLQHALADDRLRSLLKTKAQLKKELLDFTDDTSRDALIRDLVKDQPEFKRKVKEVQ
KSSNKKSKRRKTTLLDDDDDFDAVLTAASSGFVETERDALVRKGMLTPFHQLKGFERRVQ
DSESFGRQSTAADINSNDNDLASTSIDKAVQSISQAAQARPTTKLLDSASLPKLEAPTHP
FQRLRKPLKIPQSLETTPEKNGDGTRKKKRPLPSKKWRKLASREQSQNEGSDVNTSSHED
NQGDIEDVEPPFVALEGGFRIPETIFNSLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGK
TVQVLSFLGSLHFSNMYKPSIIICPVTLLRQWKREAKKWYPSFHVEILHDSAHDLSSKKK
QADSESDYESEDLLDSETEGNTSSRTSKKWDPVIARVVRSNSGLLITTYEQLRILGEKLL
DIEWGYAVLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGK
LGVLPVFEAEFAVPISVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTK
KTEHVLFCSLTPEQRSVYRAFLASSEVEQIFDGNRNSLYGIDVMRKICNHPDLLEREHSC
RDPDYGNPERSGKMKVVAEVLKVWKEQGHRVLLFSQTQQMLDIFERFLVTCEYNYRRMDG
VTPVKQRMALIDEFNNTDDIFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARER
AWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDMKDLFTL
NDDENGGSTETSSIFSQVSEDVNIVGAPDNQDKRSFKATSEKDGDSNIGGGNNSKTKGNV
GDGNSNGELDGEASILQSLFDAHGIHSAMNHDAIMNAHDEEKLKLEEQASQVAQRAAEAL
RQSRMLRSRENVAVPTWTGKSGAAGGPSSVKRKFGSTVNPQLTSKLSEESLNDSASRANA
FAAGASAGKALSSAELLARIRGNQEKAVSDGLVHQFGMSASTSNGRAGSLNSGHRSASCS
YVVQPEVLVRQICTFIQQRGGKTNSASIVDHFRDRVPSKDLPLFKGLLKEIATLDKQPSG
SFWVLKPEYQDQ
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaggaggaagataagattttactcagcagtttgggtgtgacctctgcaaat
cctgaagatattgaacatgacatcttggaaaaggcaacaaggcaccctggggagagcaat
gaagctaccgggagtgctgaagaagagatagtggaaagaaagaaaggcaatgaagaagga
caggataagaaattagatttgtataataaactgagagcagtagaagtagaaatagatgcg
attaagagtggttttggacacttggagcgcttcagaagacatgaggaggaagtcccagat
actgatggtagaagcgaggtaaagcagacagagagtgagcaaagcgttattcaggcacct
ctggatgattcaaaccttcaacatgctttagctgatgatcgtctaagaagtcttctcaaa
acgaaggctcaacttaagaaagaacttttggattttactgatgatacttcgcgtgatgca
ttgatacgagatcttgttaaggatcaacctgaattcaaaagaaaggtgaaggaagttcag
aaatcaagcaacaagaagagcaaacggcggaagacgacattgctggatgatgatgatgat
tttgatgcagtgttaactgcagcatcttctggatttgttgaaacagaaagagatgcactg
gtaaggaaaggaatgttaacccccttccaccagctcaaaggctttgaacgtcgggttcaa
gattcggagtcttttggcagacaaagtactgcagctgatataaacagtaatgacaatgac
ctggcttccaccagtatagacaaggctgtccagtcaatttcacaggcagctcaagctcgt
ccaaccaccaagttgcttgattctgcttcattaccaaaactcgaggcaccaacccaccct
ttccaaagactaaggaaaccccttaaaatccctcaatcgttagagactacaccagagaag
aatggagatggtaccaggaagaagaaaagaccgttacctagcaagaagtggagaaagttg
gcatctcgtgagcaaagccagaatgaaggatcagatgtcaatacctccagtcatgaggac
aaccaaggggatattgaagatgtagaacctccttttgtggcacttgaaggtggattcaga
atcccggaaactatctttaacagtctttttgactatcagaaggttggtgtacagtggctg
tgggaacttcactgtcaaagagctggtgggataattggagatgagatgggtcttggtaaa
accgtacaggttttatcttttcttggatcactgcattttagcaatatgtataagccaagc
attatcatttgtcctgtcactcttttgaggcaatggaagagggaagctaaaaaatggtat
cccagcttccacgtggagatattacatgattcagctcatgatctatcaagtaaaaagaag
caagcagattctgaaagtgactatgaaagcgaagatctgcttgacagtgagactgaagga
aacacatcttcgaggacttccaaaaaatgggatcccgtgatagctcgtgttgtaagatca
aattctggactattgatcaccacttatgagcaactccgtatattgggagagaaattactt
gacatcgaatggggttatgcagtgttagatgaaggacatcgaattcggaatccaaatgct
gaagttactcttgtatgcaagcagctccagactgttcaccgtatcataatgacaggggcc
ccaattcaaaacaagctgagtgaactgtggtcattgtttgattttgtcttccctggaaag
ttgggagttctacctgtgtttgaggctgaatttgctgttcccatatctgttggggggtat
gctaatgcaacacccttgcaagtttccacagcttacagatgcgctgtggtgttgcgtgac
ttaatcatgccttacctcctccggcggatgaaagctgatgtcaatgctcatctcactaag
aaaactgagcatgtcctcttctgcagcctcacaccagagcagcgatctgtttaccgagct
tttcttgctagctctgaggttgaacagatctttgatgggaacaggaattctctgtatgga
attgatgtaatgcggaaaatttgcaaccatcccgatcttcttgagagagaacattcctgt
agagatccagactatggaaatcctgaacgcagtgggaaaatgaaagttgttgcagaagtg
cttaaggtatggaaagaacaggggcaccgtgttctccttttttctcaaactcaacagatg
cttgatattttcgagagatttctggttacttgtgagtacaattataggcggatggatggt
gtcactcctgtaaagcagaggatggctttgatagatgaatttaacaatacagatgatatt
ttcatcttcatcttgacaacaaaagttggtggtctggggacaaacttgacaggagctaac
agagtaatcatttttgatcctgactggaacccatcaactgacatgcaggcccgggagcgt
gcttggcgaattggtcagaaaaaggatgttacagtgtatcgattgattacccgaggaacc
atagaggagaaggtgtatcatcgacagatttacaagcactttcttaccaacaaaatattg
aagaacccacagcaaagaagatttttcaaagcaagagatatgaaggatctctttacatta
aatgatgatgaaaatgggggatctacagaaacatctagcattttcagccaggtatctgaa
gatgtgaacattgttggggccccagataatcaagataaacgatcttttaaagcaacgtca
gaaaaggatggtgattccaatattggcgggggaaacaactcaaaaaccaagggaaacgtg
ggagatggtaacagcaatggggagttagatggagaagcaagcatcctgcagagtcttttt
gacgctcatgggatccatagtgcgatgaatcatgatgctatcatgaatgctcatgatgaa
gagaagttgaagctagaggagcaggcatcccaagtagctcagagagctgcagaagcactg
cgacaatcaagaatgcttcgaagtcgagaaaatgtagcagtgccaacttggactggcaaa
tcaggagctgctggggggccatcatctgttaaaaggaaatttggttctactgttaatcct
caattaaccagtaagttatctgaagaatcattgaatgactctgctagtagggcaaatgct
tttgctgctggggcatctgctggaaaagcattatcttcagcggagttattggctaggatt
agggggaaccaagagaaagccgttagtgatggacttgtgcatcagtttggtatgtcggct
tcaacctcaaatggcagagcaggttctctaaatagtgggcatcggagtgcatcttgtagc
tacgtagttcagccagaggtgttggttcgccagatctgcacgtttatacaacagagaggt
gggaaaaccaattcagccagcattgtagatcatttcagggaccgggtaccatcaaaggat
ctgccactgttcaagggtcttttgaaggaaatagcgactctggataaacaacctagtgga
tctttttgggtgttaaagcctgaataccaggatcagtag
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integrated database retrieval system
