KEGG   Nicotiana tabacum (common tobacco): 107813826
Entry
107813826         CDS       T04643                                 
Name
(RefSeq) protein SDE2 homolog
  KO
K25059  replication stress response regulator SDE2
Organism
nta  Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:nta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nta03041]
    107813826
   03032 DNA replication proteins [BR:nta03032]
    107813826
   03400 DNA repair and recombination proteins [BR:nta03400]
    107813826
Spliceosome [BR:nta03041]
 Complex C
  Other components
   Complex C specific factors
    107813826
DNA replication proteins [BR:nta03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    107813826
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    107813826
SSDB
Motif
Pfam: SDE2_2C SDE2 DUF7096 ubiquitin DUF4901 Cupin_8
Other DBs
NCBI-GeneID: 107813826
NCBI-ProteinID: XP_016494619
UniProt: A0A1S4C0P6
LinkDB
Position
Un
AA seq 461 aa
MEMKEGSVIHQVLVKLLDGKHKTLNFSTSSISTLTLKQKIQALTSIPCHLQLLLLSNSFY
PLHDDLQTLNLSNRSNFPVVVNLLVRLRGGKGGFGSLLRGAATKAGQKKTNNFDACRDMS
GRRLRHVNAEKKLEEWRAEAEERKLEKMAEEFLKKNAKEAAKKGNKSGDSNTDKYVQKYR
DDSAKCMEEVERSVRESLKGFVSSKRKGAAELNESDPKKLKIWLGKRIMGDSDSEDLDDD
DSEEDEEENDKSIVIDNGNNSDSNGEAEGSLDSVTGRKVDGVTSESGSEEEKDTLKNLEF
GNDVNVVSVQHEGESPSTLTPDNQEKPGQNCVASIVGTDIASATESIQTGKEVSGSSEPI
VVEASSGEKENDVAEASGSLSPKPVPLEDATSKDSDLNKPFNFEEFSSASELEALGMERL
KSELQVRGLKCGGTLQERAARLFLLKTTPLEMLPKKLLAKK
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggagatgaaggaagggtctgtaattcatcaagtcctcgttaaacttctcgatgggaag
cacaaaaccctaaatttcagtacctcatccatctcgaccctaaccctaaagcagaaaatc
caagccctaacttcaatcccttgtcaccttcagctcctactcctttccaattcattctac
cccctacatgacgacctccaaactctaaatctctcaaacaggtctaattttccggtggtg
gtgaatttgttggtgcggctgaggggcggtaaaggaggattcgggtcattgctgagagga
gcggcgacgaaggcagggcagaagaagacaaataatttcgacgcttgcagggacatgagt
ggacgaaggctaaggcatgtgaatgcggagaagaagctggaagagtggagggctgaagcg
gaggagaggaagttggagaagatggcggaggagttccttaagaagaatgccaaagaagcg
gcaaaaaagggtaataagagtggagatagtaacacggataagtatgtgcagaagtatagg
gatgattctgctaagtgtatggaggaagtagagagatctgttagggaatcgcttaagggg
tttgtgtcatctaaaagaaaaggtgctgctgagctcaatgaatctgatcccaagaagctc
aagatatggttgggtaagaggataatgggtgacagtgatagcgaggatctagatgatgat
gacagtgaggaagacgaggaagagaatgacaaatccattgtcatcgataatgggaataat
tcagactccaatggagaagcagagggaagtttggattctgtgactggcaggaaagttgat
ggtgttacatctgagagcggctccgaggaagaaaaggatactctgaagaatcttgaattt
ggtaatgatgtcaacgtagtttcagttcagcatgaaggtgaaagtccctccacactcact
ccagacaatcaagaaaaacctggacagaattgtgttgcctctattgttggtactgatatt
gcatctgcaactgaaagtattcaaacaggaaaggaagtttctggtagttctgagccaatt
gtagtggaagctagctctggtgagaaagaaaatgatgttgctgaagccagcggtagttta
agccctaaaccagttcctctggaagatgcaacctcaaaggattcagacttgaacaagcct
ttcaattttgaggaatttagttcagcatcagaactggaggccctcggtatggagaggtta
aaatcagaacttcaagtgcgtgggttgaagtgtgggggcactctgcaagaacgtgcagcc
aggcttttcctactcaaaaccacacctttggagatgcttccaaagaagttgctcgctaag
aaataa

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