Nicotiana tabacum (common tobacco): 107814119
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Entry
107814119 CDS
T04643
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03013
Nucleocytoplasmic transport
nta03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107814119
03015 mRNA surveillance pathway
107814119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107814119
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107814119
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107814119
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
107814119
NCBI-ProteinID:
XP_016494937
UniProt:
A0A1S4C1B1
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All DBs
Position
Un
AA seq
454 aa
AA seq
DB search
MADSSNTSSSTAATTTANPPEIRSWADEADEIDQAEKSSAANESDSAEPKIGSLQIDESK
RVNNSTLDDPEDSRIEAVTSGDTLYKSAKRFEDLNLSPELLKGLYVEMKFERPSKIQEIS
LPMILTPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPKLAAPQALCICPTRELAIQNMEVL
LKMGKFTGITSELAXRHLLINVLLCAQTGFQDDSIRIMKAIVKASADSQVLLFSATFGEN
VKAFVTKIVRDLFVKDYNQMFVKKEELSLDSVKQYKVQCPDELSKVMVIKDKILELGQKV
GQTIIFVRTKNGASMLHKSLVDYGYEVTTIQGALKQEDRDKIIKEFKEGLTQVLISTDLL
ARGFDQSQVNLVVNYDLPVRHESPSEPDHEVYLHRIGRAGRFGRKGAIFNLLCNDRDDML
MSKIENHFNSQVTEIASWKSDEDFENALKKAGLL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagctcaaatacttccagtagcaccgccgcaactacgacggcaaacccgccg
gaaatcagaagttgggcagacgaagccgacgagatcgatcaagccgagaagtcctctgct
gctaatgaaagcgatagcgccgagcccaaaatcggatctctacaaatcgacgagtccaaa
agagtcaacaattccactctcgatgatccagaagattccagaatagaagccgttacatct
ggcgacacgttgtacaaatcagctaagagatttgaggatttgaacttatctccggagttg
ttgaagggattatatgtagagatgaagtttgagcgacctagtaaaattcaagagattagt
ttgcctatgattcttacgccgccctacaagaatctaattgctcaggctcataatggttct
ggtaaaactacttgctttgtgcttgggatgttgagtcgggttgaccctaagcttgctgcc
cctcaagctctctgtatctgcccaaccagagaattagcaattcagaatatggaggttctg
ttgaagatggggaagttcactggtataacatcagagttagctatncgtcatttgcttatt
aatgttcttctttgtgcacagaccggttttcaggatgattccataagaataatgaaggca
atagtcaaagccagtgctgacagccaggtgcttctgttttctgcaacttttggggaaaat
gtaaaagcctttgtgacaaaaattgttagagatcttttcgtgaaagattacaaccagatg
tttgtgaagaaagaagaactttcgctggattcagtgaagcagtataaagtgcagtgtccg
gatgaactttcaaaagtcatggtgattaaagacaaaatacttgaactaggacagaaggtg
gggcagacaattatatttgttcgtacaaaaaatggtgcgagtatgttgcataaatcattg
gttgactatggatatgaagtgacaacaattcaaggtgctttgaagcaagaagatagagac
aaaataatcaaggagttcaaagaaggattgacacaagttcttatatcaactgatcttctt
gctcgtggatttgaccaatctcaggttaatttggtggttaattatgatctcccggtgaga
catgagagtccatcagagccagatcatgaggtatacttgcatcggattggtagagctggg
cgttttggccgcaaaggtgccatattcaacttgctctgcaatgaccgggacgacatgcta
atgtcaaagattgagaatcatttcaacagtcaagtgacggagatcgcctcatggaagagc
gatgaagattttgagaatgctctgaagaaagctggcttgctctaa
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