KEGG   Nicotiana tabacum (common tobacco): 107814392
Entry
107814392         CDS       T04643                                 
Name
(RefSeq) protein SMG7-like
  KO
K14409  protein SMG7
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107814392
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107814392
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     107814392
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107814392
SSDB
Motif
Pfam: EST1_DNA_bind EST1
Other DBs
NCBI-GeneID: 107814392
NCBI-ProteinID: XP_016495286
UniProt: A0A1S4C2B6
LinkDB
Position
Un
AA seq 995 aa
MMTIPMDSAVDHLSREQVQRLYNKNVELENKRRKAAQARVPSDPSAWQQMRENYEAIILE
DNAFSEQHEIEYALWQLHYRRIEELRAHFNAAVNSSVSTNSQNGKVPRRSGPDRVTKIRT
QFKTFLSEATGFYHDLMLNIRAKYGLPLGLFSDDQENQIPSSKDGNKSVEVKKGLISCHS
CLIYLGDLARYKGLYGVGDSKACDFAAASCYYLQASSLWPSSGNPHHQLAILASYSNDEL
VAIYRYFRSLAVESPFATARDNLIIAFEKNRQCYSQLVGDTKASSTKAVRPRTTGKGRSK
GETRHPLKDGRVEASSVQEKGSSMSDIFKTFSTRFVRLNGILFTRTSLETFGEVQSVVKN
DLLELLSSGTDEKYNFGSDTADCKLAFVRLVAILIFTVHNVNKESENQSYAEILQRSVLL
QNAFTAVFEFMGHVVERCVQLNDPTTSFLLPGVLVFVEWLASRQDVALGNEPEEKQTRAR
SFFWKNYIAFFNKLLSSGFKFVAYDKDDACFFNMSRYDEGESDNRLALPEDFELRGFIPF
LPAQLILDFSRKHSFGGDGGIKEKKSRLRRIIAAGKALANVVRVGEEGIYFDGRAKKFIL
GIEPQVSDDYALNCSMEVTKLSGIELENSAAGQLTVGALQPKQQLYVEGEEEDEVIVFKP
SVVEKHVNGSASNMMTSEGHVSGVSAASVPPAVSVASVGLGKEMGPFSAALDGLIMQSAL
HASARPPSSIANNSGQYMQPIQPSALLWSVERAAVMNGFGSLNMIRNGPAIISELQDQVF
PPMPYSVPFPQSFNFGMTNNIPVHIPDAAIPSNFSSLSSSVVGIHSMSIKSPSVMSTGIR
KNPVSRPNRHLGPPPGFGSVPSKVLEESSSAMTIKNEHTTLPPMDDFSWLAGYQLPSSHQ
SIGFNNSINHSTQNYHSMSKSSSSVGMVSFPFPGKQVNSLHVQSGNRRGWEDYQISEQLK
LYQEQPQQLQSGNQQSVELPQRHEGQSLWEGRFFV
NT seq 2988 nt   +upstreamnt  +downstreamnt
atgatgaccattccaatggatagtgctgtcgatcatttgtctcgcgagcaagttcagcgc
ctctacaacaagaatgttgagttggagaataaacgtagaaaagcagcacaagctagagtt
ccttctgacccaagtgcatggcaacaaatgcgagaaaactacgaagctatcatccttgag
gataatgccttctcagaacaacatgaaatagagtatgccttgtggcagttgcattacagg
agaattgaggaattgcgcgcacacttcaatgctgctgtaaattctagtgtgtcaaccaat
tctcagaatgggaaagttccccgtcgtagtggacctgatcgcgtcacaaagatcagaaca
cagtttaaaacttttctttcagaagcaacaggcttttatcatgatttgatgctaaatatt
agggccaagtatggcctgccgctgggattattctctgatgatcaagaaaatcagattcct
tcctctaaagatggtaacaaatctgtggaggtgaagaaaggattgatatcctgccatagt
tgtttgatttatcttggcgatcttgctcggtacaaaggcttatatggtgtgggtgattcc
aaagcttgtgattttgcggctgcttcgtgttattacctgcaagcttcttcactttggcct
tcaagtggcaatcctcatcaccagcttgcaatactggcttcctattccaatgatgagctt
gtggctatttatcgctattttcgcagtcttgcagtagaaagcccttttgccacggcaagg
gataacttgatcattgcatttgagaagaaccgtcagtgttactctcaacttgtgggggat
actaaagcttcctccaccaaggccgtacgtcctcgtacaactggcaaaggaagaagtaaa
ggagaaacgaggcatccactgaaagatggtagggttgaagcaagttcagtccaggaaaaa
ggttctagtatgtctgacatcttcaaaaccttcagcacaagatttgttcgattgaatggt
attcttttcactcgcactagtttggagacttttggagaagtgcaatcggtggttaaaaat
gatctgcttgagcttctctcttctgggactgatgagaagtataattttggttctgacact
gccgattgtaaactggcttttgtaaggctcgtggccatcctaatattcactgttcataac
gtgaataaggaaagcgaaaaccagtcatatgctgagattttacaaagatcggttcttcta
cagaatgcattcactgctgtgtttgagttcatgggtcatgtagttgaaagatgtgtccag
ttaaatgatcccacaacaagcttccttttgccaggggttttggtgtttgtagaatggtta
gcgagccgtcaagatgttgcacttggcaacgaaccagaagagaagcaaaccagggctaga
tcatttttctggaagaactacattgctttctttaataagcttttgtctagtgggtttaag
tttgttgcttatgacaaggatgatgcgtgcttcttcaatatgagcaggtatgatgaagga
gagagcgataatcgtcttgcattacccgaggattttgagctgagaggatttatacctttt
cttccggcacaacttatccttgatttttcaaggaagcattcctttggtggtgatggtggc
atcaaagagaagaaatcacgtctccggaggataatagcagcaggaaaggctcttgctaat
gtggtccgtgttggagaagagggaatatattttgacggtagagcaaagaaattcatcctt
ggcattgagcctcaagtatctgatgattatgcgcttaattgctccatggaagttaccaaa
ttgagtggtattgagttggagaattcagctgcagggcagttaactgtaggagctctgcag
ccaaagcaacaattgtatgtggaaggtgaggaagaagatgaggtaattgtttttaagcca
tcggtggtagaaaagcatgtgaatggaagcgcttcaaacatgatgacctcagaaggtcat
gtttctggtgttagtgctgccagtgttcctcctgcggttagcgtggcctctgttggtcta
ggaaaagaaatgggtccattttcagctgcacttgatggattgatcatgcagagtgcatta
catgctagtgcaaggccaccctcaagtattgccaataacagtggccaatatatgcagccc
attcaaccaagtgctttattgtggtccgttgaacgagctgctgttatgaatggatttggc
agcttgaacatgataagaaatggtccagctataatatctgagttgcaagatcaagtattt
ccacctatgccatattctgtcccttttccccagtctttcaattttggcatgacaaataat
attcctgtgcatatcccagatgctgccataccatctaacttcagttcactttcatcctca
gtagttggtattcatagcatgtcaattaagtccccatcagtcatgtcaacaggcataagg
aaaaatccagttagcagacctaataggcatctgggtccgcctccaggctttggttctgtt
ccttcgaaagtcctggaggagtcttcttcagcaatgaccataaagaatgaacatactact
cttcctcctatggatgactttagctggctggctggatatcagttgccttcatcacatcag
agcattggtttcaataactccattaatcattcaacacaaaactaccactcaatgagcaag
agtagtagctccgttgggatggtgagctttcctttccctgggaaacaggtaaactctctg
catgtgcaatcagggaaccggagaggttgggaggactatcagatatctgaacaattaaaa
ctgtaccaggagcaacctcagcaactccagagtggaaaccaacagtctgttgaactgcct
cagcggcatgaaggacagtctctgtgggaaggccgtttttttgtgtga

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