Nicotiana tabacum (common tobacco): 107814403
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Entry
107814403 CDS
T04643
Name
(RefSeq) rhamnogalacturonate lyase-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107814403
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107814403
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Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
107814403
NCBI-ProteinID:
XP_016495300
UniProt:
A0A1S4C2C3
LinkDB
All DBs
Position
Un
AA seq
669 aa
AA seq
DB search
MGYRRCFKHMIKCLCACAVQTGACCHSGGPGTMSPIGVKLYIQDRHVMMDNGIVQVTLSN
PDGIVTGIHYNGIDNLLEVLNDESNRGYWDVVWNSLDGGRSGVFEVIKGTNFKVITETDD
QVEISFSRPWDPSLQGKLVPLNIDKRFILLRGCSGFYSYAIYEHVGSPEWPAFSLGETRI
AFKLRKDKFHYMAVADNRQRFMPLPDDRLPARCQRLAYAEAVLLNNPVEPELRGEVDDKY
QYSCDNKDNKVHGWISMDPPVGFWQITPSDEFRSGGPVKQNLTSHVGPTTLAMFLSSHYA
GDDLTPKFAQGEAWKKVFGPIFIYVNSVMQGEDPVALWDDANIQMQVEVLSWPYCFPASE
DFPSADQRGNVSGRLLVQDKYINDDYIAANGAYVGLAPPGEAGSWQKECKDYQFWATADN
DGYFSINNIRPGDYNLYAWVPGFIGDYLYETPISISPGRNVDVDEIVYQPPRDGPTLWEI
GIPDRTAAEFFVPEPNPRFINKLFVNHPDRFRQYGLWERYSELYPKDDLVYVTGESDYSK
DWFFAQVPRRKEDGTYQGTTWQIRFKLDSVNQGGTYKLRIAIASATLAEVQVRVNDPNTN
RPLFSTGLIGRDNSIARHGIHGLYWLYNIDIQGNLLVQGDNTIYLGQPRNQSPFQGIMYD
YIRLEAPPN
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgggttatcggcgttgtttcaaacacatgataaaatgcttatgcgcgtgcgctgtacaa
acaggagcttgttgtcatagcggaggtcctggaacaatgtccccaattggagtgaagttg
tacattcaggatcgccatgtgatgatggataatggcatagtccaagtcacgttatcaaat
ccggacggaattgtcaccggaatacactataatggcattgataatctacttgaagtcctt
aatgatgaatccaaccgaggatactgggacgtcgtctggaattctctagatggtggaaga
agtggagtatttgaagtgatcaagggtacaaatttcaaggttataacagagacagacgat
caggttgagatatcattttcccgaccatgggatccctccctccaaggcaaacttgttccg
ctgaatattgacaaaaggtttattttgctccgtggctgctctggtttctactcctatgcc
atttatgagcatgttggttcacctgagtggcctgccttcagccttggtgaaactagaata
gcattcaagctccggaaagataagtttcattacatggctgtggcagacaataggcaaaga
ttcatgcctctaccagatgaccgattgcctgcaagatgccaacgccttgcttatgcagaa
gcggtcctacttaataatcccgtggagcctgagctaagaggagaggtcgatgacaaatac
cagtactcatgcgataataaagacaacaaggtccatggctggatatctatggatccacct
gtggggttctggcaaattactccgagtgatgaatttcgatctggtggacctgtcaaacag
aacctcacatcccatgtcggtccaactaccctagctatgtttctaagctctcattacgct
ggggacgatctaacaccaaaatttgctcaaggggaagcatggaagaaagtttttggcccc
atttttatatatgttaattctgttatgcaaggggaagatcctgttgctctatgggatgat
gccaacatacagatgcaggttgaagttctaagctggccttactgttttccagcatcagaa
gattttccatcagcagaccaacggggcaatgttagtggaagacttttggttcaagacaag
tacattaatgatgattatatagcagcaaatggcgcttatgttgggcttgctccaccagga
gaagctggttcctggcaaaaagaatgcaaggactaccaattttgggctacagcagacaac
gatggatacttctccataaacaatatacgtccgggggactacaatctttatgcatgggtc
cctggattcattggggactatttatatgagactcccatttccatatctccaggtcgtaat
gttgatgtggacgaaatcgtatatcagcctccaagggatggccccacattatgggaaata
ggcattcctgatcgtactgctgcagaattttttgttcctgaacccaacccaagatttatc
aacaagcttttcgtcaatcatcctgataggtttaggcaatatggattgtgggaaagatac
tccgagctatatccaaaggatgaccttgtgtatgtaactggagaaagtgactatagtaaa
gactggttttttgctcaggttccaaggagaaaagaggatggcacatatcaaggaacgacg
tggcaaatcagatttaaacttgattcggtcaatcaaggaggaacttataaattgcgcatt
gcaattgcatctgcaactttagctgaagtgcaggttcgggtgaatgatccgaacacaaac
cggcctctattttcaaccggattgattggaagagataactcaattgctaggcatggaatt
catggcctatattggttgtacaatatagacatacagggaaatctgctagtgcagggagat
aacactatttacttgggccaaccaagaaaccaaagtcctttccaggggattatgtatgac
tatattcgtcttgaagctccaccaaactaa
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