KEGG   Nicotiana tabacum (common tobacco): 107814868
Entry
107814868         CDS       T04643                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
  KO
K10752  histone-binding protein RBBP4
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03082  ATP-dependent chromatin remodeling
nta03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107814868
   03083 Polycomb repressive complex
    107814868
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nta03036]
    107814868
Chromosome and associated proteins [BR:nta03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     107814868
  Histone modification proteins
   HAT complexes
    HATB complex
     107814868
   HDAC complexes
    Sin3A-HDAC complex
     107814868
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     107814868
    PRC2.2
     107814868
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     107814868
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    107814868
  Chromatin remodeling factors
   NuRD complex
    107814868
   NuRF complex
    107814868
   NuRF complex (fruit fly)
    107814868
SSDB
Motif
Pfam: CAF1C_H4-bd WD40 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_EIPR1 WD40_Prp19 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_IFT122_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd
Other DBs
NCBI-GeneID: 107814868
NCBI-ProteinID: XP_016495850
UniProt: A0A1S4C3Z3
LinkDB
Position
Un
AA seq 310 aa
MKEERAAKGGEQRSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQFEQATYKNRQ
RLYLSEQTDGSVPNTLVIANCEVVKPRVAAAQHISQFNEEARSPFVKKYKTIIHPGEVNR
IRELPQDSKIVATHTDSPDVLIWDVESQPNRHATLGVNNSRPDLILTGHQDNAEFALAMC
PSEPFVLSGGKDKSVVLWSIHDHVSTLAADQGATKSPGSGASNSKPSAEGPTVQARGIFQ
GHDDTVEDVQFCPSSAQEFCSVGDDSCLILWDARTGSSPAVKVEKAHNADLHCVDWNPHD
VNYILTGSAD
NT seq 930 nt   +upstreamnt  +downstreamnt
atgaaggaagagagagcggcgaaaggcggagaacagcggtcggtggacgaacgttacaca
cagtggaagtcactggttcctgttctctacgattggcttgctaaccacaacctcgtttgg
ccttccctctcctgtcggtggggtccccagtttgagcaagcaacttacaagaaccgccag
cgcctctacctttctgagcagactgatggtagcgttccaaatacgcttgtcatagctaat
tgtgaagttgtaaaacctagggttgcagcagcacaacacatatctcagttcaacgaagaa
gcacgttcgccttttgtaaagaagtacaaaactattattcatccgggtgaggtgaatcga
ataagggaactgcctcaggatagcaagattgtggccacacacactgacagtcctgatgtt
cttatttgggatgttgagtctcagcctaaccgtcatgctaccttgggcgtaaataattct
cgaccggacttgatattgactggacatcaagacaatgctgaatttgcgctcgctatgtgc
ccttctgagcctttcgtgctctctggagggaaggacaaatcggttgttctctggagcatt
catgaccatgtgtcaacattagcagcagaccagggagctacaaagtctcctggatctgga
gcaagtaactcgaaaccttctgcagaaggccctactgttcaagctcgaggtattttccaa
ggacatgatgataccgtagaagatgttcagttttgcccttccagtgcacaggagttttgc
agtgttggagatgattcctgcctaatactgtgggatgcaagaactggttcttctcctgct
gtcaaggtagagaaggctcataacgctgatcttcattgtgttgattggaatcctcacgat
gtaaattatattttgactgggtcggcagac

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