Nicotiana tabacum (common tobacco): 107815163
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Entry
107815163 CDS
T04643
Name
(RefSeq) small RNA degrading nuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107815163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107815163
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Pre-60S particles
RNases
107815163
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
107815163
NCBI-ProteinID:
XP_075082568
LinkDB
All DBs
Position
12:complement(51346575..51359817)
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AA seq
573 aa
AA seq
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MSCQNSKTEETPDEQHNTCKDPKHKPFFDVYGPQGRADIVFNQPESNSTLNLQDVQGLVT
WVLADGFMPSWAFIKNKPLIPKVVMLYVPGLDAALYLSQSKVLKGFKECCGIPRPVLALS
CVSDGNQTIDALLTYKSKRKRKEAEHISPRNTESSEQGAETPTTEPLSFVDLKKDIPFPI
SYYTLTDKELEENGYCYDQPEFLSTLPAPSGTSPHEILALDCEMCITREGFELTRVTLVD
VKGQVLLDKLVKPSNDIVDYNTRYSGITCQMLEDVTTTLKDIQEEFLKLVHKETILVGHS
LENDLLALKIIHNLVIDTAVLYKHPRGSYKAALRVLSRKFLGREIQDSGNGHDSIEDAKA
TLELALLKIKNGPDFGIPQCQRLLRQKLLSVLSDSGKKSSIIDHISIVRRYAAELSHTIP
VSSDDEALSKANKEVRNDKVQFIWTQFAELYAYLRKQADEPEKLNKKLAEMIALLTCEKK
STSRKNFKYDITPELKDILSHMNRRVRSIYSNLPLNAMLIICTGHGDTAIVQRVRKILSE
QTDASMSRENIVKVLEELQAQAEVGLCFVGVKH
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgagttgccagaacagtaaaacagaagaaacgcccgacgaacaacacaatacctgcaaa
gaccctaaacacaaacccttctttgacgtttacggccctcaggggagagcagatattgtt
ttcaatcaaccagaatccaactcaaccttgaaccttcaagacgtgcaaggtcttgtcacg
tgggtgcttgctgatgggttcatgccgtcatgggcttttatcaaaaacaagcctttgatc
cctaaagtggttatgctgtatgttcctggccttgatgccgctctatatttatcacagtct
aaagtgctcaaaggtttcaaagaatgctgtggtattccgaggccagttttagctctcagt
tgtgtatcagatggaaatcagacaatagatgcactccttacgtacaaatcaaagaggaaa
agaaaagaagctgagcacatttcaccaagaaacaccgagtcttctgaacaaggtgctgag
actcccactacggagcctctatcttttgttgacctcaaaaaggatataccatttcccatc
agttattacacacttacggataaggaactagaagaaaatggatactgttatgaccaacca
gaatttctttcaacgctccctgctccttcaggaacatctccacatgaaattttggccctt
gactgcgagatgtgtattacaagggaaggctttgagcttaccagagtgacactagtggat
gttaaaggacaggttctactggataaattggtcaaaccatcaaatgacattgttgactac
aatactaggtatagtggaattacttgtcagatgttggaggatgtgactaccactcttaaa
gatatccaggaggagttcttgaaactggttcacaaggagaccattctggttgggcattcc
ttggaaaatgatttgttagccctgaagatcattcataatttggtaatcgatactgctgtg
ttgtacaaacatccaagaggatcctacaaagctgctcttcgcgttctgagcagaaaattt
ctcggcagggagatacaggactcgggcaatgggcatgacagcattgaagatgcaaaagct
actctggaactagcactactaaaaataaaaaatgggcctgattttggtatacctcaatgt
caacgattactgcggcagaagcttctttcagttctgagtgactctggcaaaaaatcctca
atcattgatcatatttccatagtgaggagatatgctgctgaattgtcccatacaattcca
gtatcatctgatgatgaagcactttcaaaagccaacaaagaggtcagaaatgataaagta
cagtttatctggacgcaatttgcagagttatatgcatatctcaggaagcaagcagatgag
cctgagaagctaaataaaaagttggcagaaatgatagcattgctgacgtgtgagaaaaag
tctactagcagaaaaaatttcaaatatgatatcacccctgaactgaaggacattctgagc
cacatgaatcgtagagtcaggagcatttactccaatcttcctctaaatgcaatgcttatt
atttgcactggtcatggagacactgcaatagttcaaagagtgaggaaaatcttgtcggag
cagacggatgcctcaatgtcccgtgagaatattgttaaagtcttggaagagttgcaggca
caagctgaagttggtttgtgctttgtaggtgtcaaacactga
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