Nicotiana tabacum (common tobacco): 107815409
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Entry
107815409 CDS
T04643
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107815409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nta03400
]
107815409
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
107815409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
107815409
NCBI-ProteinID:
XP_016496467
UniProt:
A0A1S4C5I8
LinkDB
All DBs
Position
Un
AA seq
927 aa
AA seq
DB search
MAMDLGSRFVNPTAKRLQPCSPRDLFSKGTKKIKFDESGSQSNPTVAYSWREECEHEKGK
VSSGVFGRSDPFAIPDLLEALDSGKFGSVTREIEDLIKRRMKLVNSCFASDHSLPNKVLE
LERNFEKGELKGNQLAPDVIDLEDEQEAKGIASAAMVPSTCFGPSVGPVVIIDSDDEDSQ
KNFISPSQGMIHTQKSSISPFQGIPLQNALIDFQVKDFVGQGRDSAERQTLIEVVSLGGE
AEIKKDKGVYVGVQDDDEIDDGTEQPDEGLTDIWNEMSFALECSKDVAAEPSPNEHTVEE
EDECDHSFILKDDIGYVCRICGVIQRSIDTIIEFQYSKASKSIRTYHYEGRSAKDIGHAE
LLPEGIISSDDIDTTEICVHPRHKKLMKAHQVEGFNFLVSNLLKDKGGCIMAHAPGSGKT
FMIISFLQSFMANNDRARPLVVLPRGILATWKKEFLRWQVDEIPLYDFYSVKADNRSQQL
EVLKQWSQERSILFLGYKQFSTIVCDNVGSTTAAACQEILLKCPSILILDEGHTPRNQDT
DVLTSLEKVQTRLKVVLSGTLYQNHVKEVFNILNLVRPKFLKLEDSRNIKRTILSKVASS
GRKNLLKKSNDNDFYELVEHTLLKDDNFSRKSSVILGLRDMTSKVLHYYKGDFLEELPGL
VDYTVLLNLHPKQKSEVAELKKLGRKFKISSEGSAMYVHPQLKSLSRNFSVKERVDEEKI
DMLLENLEVREGVKAKFYLNLLQLCESKGEKLLVFSQYLLPLKFLERLTVRTKGYSLGKE
IFLITGDSDSETRESSMERFNTSADARVFFGSIKACGEGISLVGASRIIILDVHLNPSVT
RQAIGRAFRPGQVRKVYTYRLIASGSPEEEDHQTCFKKESIAKLWFEWSEYYAQPDFEME
TVNIENCDDMFLESPRLNEDVVALYKR
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggacttagggagcagatttgttaaccctacggctaaaaggttacagccctgt
agcccccgagatttattttctaagggaacaaaaaagataaaatttgatgaaagtggaagc
cagagtaaccctactgttgcatatagctggcgggaagaatgcgaacacgaaaaaggaaag
gtgtcatcaggagtttttggccgctctgatccgtttgctattccggacttgcttgaagcg
ttagattctgggaagtttggaagtgtcaccagagagattgaggaccttattaagcggcga
atgaagttagtgaactcttgttttgcaagtgatcattcacttcccaacaaagtcttggaa
ttagaaaggaactttgagaaaggggagttaaaaggaaatcagcttgcgcccgatgtaatt
gacttggaggacgagcaggaagctaaaggcattgcttcagcagcaatggttccctctaca
tgttttggaccttcagttgggcctgttgttattattgattcagatgatgaagacagtcaa
aaaaacttcatctctccatctcaggggatgattcacactcagaagagttctatttctcca
tttcaggggatccccttacagaatgctttgattgactttcaagttaaggattttgtgggg
caggggagggattctgctgaaagacagactttgatagaagttgtaagcctcggtggagaa
gctgaaataaagaaagataaaggtgtttatgttggtgtacaagatgatgatgagattgat
gatggcaccgagcagcccgatgaaggtttgactgatatatggaatgagatgtcatttgct
ctcgaatgctcaaaggatgttgctgctgaaccttcaccaaatgagcatacagttgaagag
gaagacgagtgtgatcattccttcatcttgaaagatgatattggttatgtctgtcgtata
tgcggagtcattcagagaagcattgataccatcattgaattccagtattcaaaggcctcc
aagagtataagaacgtaccactatgaaggtcggtcagccaaggatatagggcatgctgaa
ctccttcctgagggcatcatttcatctgatgacattgatacgactgaaatttgtgttcat
ccaagacacaagaaactgatgaaagctcaccaagttgagggatttaattttcttgttagc
aacttgttgaaagataaaggaggctgtatcatggctcacgcccctggatctggcaagact
ttcatgataatcagcttcctacagagttttatggccaataatgatagagctaggcctttg
gtggtgttacctagaggaatcttggctacatggaagaaagagttcttgaggtggcaggta
gatgaaattcccctctatgacttctactcagtaaaagcagataatagatctcaacaattg
gaagttctgaagcaatggtcacaggaaagaagtattctttttctaggctataagcagttc
tcaacaatcgtgtgtgacaatgttggcagtacgactgcagctgcttgtcaggagattctg
ttgaagtgcccatcaattctcattcttgatgaagggcacactccgcggaaccaagacact
gatgttttgacttcactcgagaaggtccagacgcgactaaaggtggtgctttctggcacc
ctctaccaaaaccatgttaaagaggtctttaacattctgaaccttgtgcggccaaaattt
ctcaagttggaagattccagaaacatcaaaaggacaatactgagcaaagtggccagctca
ggcagaaagaacctcttgaagaaaagtaatgataatgatttttatgagttagtagagcat
acattgttaaaggatgacaatttctcaaggaagagttctgtcatactaggtctgcgggat
atgaccagtaaagtgcttcactattacaagggagacttcctcgaagaacttccaggattg
gtggattacactgtccttctaaacctccatcctaagcagaaaagtgaagttgcagagctg
aagaaactgggaagaaagttcaaaatcagttctgaaggaagtgcaatgtatgtgcaccca
caattgaagagcctttcaagaaacttttctgttaaagaaagagttgatgaagagaagatt
gatatgctcttagagaatttggaagtgagggaaggagtgaaggccaaattctaccttaac
ctgctgcagctgtgtgaatcaaaaggtgaaaaactgctagtgtttagccagtacctcttg
cctttgaaattcttggagaggttgactgttaggactaagggttacagtctggggaaggaa
atatttctgatcactggtgattcagactcggaaaccagggagtcatcaatggaacggttt
aacacttcagcagatgctcgtgttttctttggttcaattaaggcatgtggtgaaggaata
tcacttgttggggcatctcggattatcatattggatgtacatctcaacccgtcagtaacc
cgtcaagcaatagggcgtgcattccgaccaggtcaggtcaggaaagtatacacttacaga
ttgatagcctcaggttcacctgaggaggaagatcatcaaacttgttttaaaaaggagtct
attgcaaagttgtggttcgagtggagtgagtattatgcccagcccgattttgagatggag
actgtcaatattgaaaactgtgatgatatgtttttggaatcaccacgtcttaatgaggat
gtggtggctctgtacaaaaggtag
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