Nicotiana tabacum (common tobacco): 107815417
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Entry
107815417 CDS
T04643
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03030
DNA replication
nta03420
Nucleotide excision repair
nta03430
Mismatch repair
nta03440
Homologous recombination
nta03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107815417
03420 Nucleotide excision repair
107815417
03430 Mismatch repair
107815417
03440 Homologous recombination
107815417
03460 Fanconi anemia pathway
107815417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nta03000
]
107815417
03032 DNA replication proteins [BR:
nta03032
]
107815417
03400 DNA repair and recombination proteins [BR:
nta03400
]
107815417
Transcription factors [BR:
nta03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107815417
DNA replication proteins [BR:
nta03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
107815417
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
107815417
MMR (mismatch excision repair)
107815417
DSBR (double strand breaks repair)
HR (homologous recombination)
107815417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
zf-CCHC
tRNA_anti-codon
zf-CCHC_3
DUF223
DUF936
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
107815417
NCBI-ProteinID:
XP_016496475
UniProt:
A0A1S4C5L7
LinkDB
All DBs
Position
Un
AA seq
908 aa
AA seq
DB search
MPPINLTEGAIAILTNREAHAEDFKPVLQITDIRLVNTQNQNNNNERYRILLSDGEFLQQ
GMLATQKNDLIRSQQIQKGSIIQMNQFVCNNIQNRMIIIVIELDILLETCDTIGEPKHYL
PNGISPSVPGPAAPLQPSTNQLGGLSGSPQSFTAVSATSSSAPRSNMPGGMRSPESTRSI
GYNTSSAGNIDSERYSSTSAPLYPKAESGPAISRAPMNNYVRPPQPSYQQHPQSSYQQPP
PLYSNRGPIAKNEAPPRIVPIAALNPYQGRWTIKARVTAKAELRHYNNQRGDGKVFSFDL
LDSDGGEIRVTCFNSVADQFYHQIEPGRVYLISKGSLRPAQKSYNHLPNDHEIMLESTSV
VQPCFEDDRTIPQQQFHFRPISDIEALENNSVVDVIGVVSSISPSSSIMRKNGTETQKRV
LQLKDMSGKSVELTLWGNFCNAEGQTLQSMCDSGASPVLAVKAGRVNDFNGKSVGTISTS
KLFTEPDFPEALKLKAWFEREGKNMPSVSLSREVSSIGRTDVRKTISQIKDERLGTSEKP
DWITISATVTFIKGENFCYPACPLMIGDRQCNKKVTNNGDGKWRCDRCDQTVDECEYRYI
LQFQIQDHTGLTWVTAFQECGDQIMGVSAKELYFLKYEGQDDDRFTDIMRNVLFNKFIFK
LKVKEEMFSDEQRVKSTVVKAEKLNFQSEIRFLLDLIDKNNGQESSTLPPKTDNATPTSV
YNNAGFGSRTIEPMNPVANYGGSNSSISRESGLQGNQQGQYGNQFTGSQFAPPGSTGMYM
SCNSCGGTGHSASNCPSIMSGQGQAYGGGFGNRVTSGMSSDGASGECYKCHQFGHWARDC
PGVSNAPPANNMTPASGMSSGGASSECYKCHQFGHWARDCPGVSSAPAANNMTPGRYGNP
PRQRVGGF
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgataaacttgacggaaggcgcgatagcgattctaacgaaccgcgaagcacat
gcggaggattttaaaccggtgttacaaatcacagatattcggttagtgaacactcagaat
cagaataacaataacgaacggtaccggatccttttatcggacggggagtttcttcagcaa
gggatgttagctacgcaaaaaaacgatcttattcggtctcaacagattcaaaaaggatct
attattcagatgaatcagttcgtttgtaataacatccaaaatcgaatgatcatcattgtc
attgaattagatattttactggagacatgtgataccattggagaaccaaagcattatctc
ccaaatggtattagtccttcagtgccagggccagctgccccacttcagccttccaccaat
caattaggtggtttaagtggcagccctcaatcctttactgctgtttcagctacttcaagc
tcagctccaagatcaaatatgcctggtgggatgcgatctcccgagtcaacccgtagcatt
ggttataatacttcctctgctggtaatattgactctgaaagatatagttcaacaagtgca
cccctttaccccaaagcagaatctggtccagcgatttcacgggctccgatgaataattat
gtgcggccacctcagccttcttatcagcagcatcctcagtcttcttatcagcagccacca
ccgttgtactcaaacagaggacctatagccaagaacgaagcaccgccgaggattgttcca
attgctgctctcaatccatatcagggtcgatggactatcaaggccagggttactgctaag
gcagaactcagacactacaacaatcaaaggggtgatggaaaagtattctcttttgatctt
cttgattctgatggaggagaaataagagtaacatgctttaactctgtagctgaccaattt
taccaccagattgagccaggtagagtgtatttgatttccaagggtagcttgagaccagct
cagaaatcttacaatcaccttccaaatgaccatgaaattatgctcgagagcacatcagtg
gttcaaccttgttttgaggatgacaggactattcctcaacaacaatttcattttcggcca
atcagtgatattgaggccttggagaacaatagtgtggtagatgtgattggtgtggtgtct
tcaataagtccatctagctcaataatgaggaaaaatggtacagaaactcagaaaagagtt
ctccagctgaaggacatgtctggcaaaagtgttgaattaactttgtggggaaatttctgc
aatgcagaaggtcaaacacttcaaagtatgtgtgattctggagcttcccctgttttggca
gtcaaagctggtagagtaaatgattttaatggcaaatctgtaggtactatatctacaagc
aagttgtttacagaaccggattttcctgaagctctaaaactgaaggcatggttcgagagg
gagggaaagaacatgccatcagtatctctttcccgagaagtgagcagcattggtcggaca
gatgtgcgaaaaactatatctcaaatcaaagatgaacgattgggcacttccgagaagcca
gattggatcacaataagtgccactgttacatttataaagggtgagaacttttgctatcct
gcctgtcccctcatgataggagatcgacagtgcaacaaaaaagtgacaaataatggggat
gggaaatggcggtgtgacaggtgtgatcagactgttgatgaatgcgaatataggtacatt
cttcagttccagattcaggaccatactggcttaacctgggttactgcatttcaggaatgt
ggtgaccagatcatgggtgtgtctgcaaaagaactgtatttcctaaaatatgaggggcag
gatgatgatagatttacagatatcatgcgtaatgtcttatttaacaaatttatcttcaaa
ttgaaagtgaaagaagagatgtttagcgatgaacagcgcgttaagtcaacagtggtcaaa
gcagagaagctgaacttccaatcagagatccggtttctgttggatttgatagacaagaac
aatgggcaggaatccagtactctgcctcctaagacagataatgcaactccaacttcagtg
tataataatgctggatttgggagtagaaccatagaaccgatgaatcctgttgcaaattat
ggtggcagcaatagcagtatcagcagagaaagtggactgcagggaaatcagcaaggtcaa
tacggaaatcagtttactggctcgcagtttgctccacctggttctacaggcatgtatatg
agctgtaatagttgtggtggaacaggccatagtgcttcaaactgtccaagcatcatgagt
ggtcagggccaggcatatggaggtggctttggcaatagggtaacttcaggaatgagcagt
gatggtgcttctggtgagtgctataaatgccatcagtttggacattgggcaagagattgc
ccaggtgtaagcaatgcaccccctgccaataacatgacacctgcttcaggaatgagcagt
ggtggtgcttccagtgagtgttataaatgccatcagtttggacattgggcaagagattgc
ccaggtgtaagcagtgcacctgctgccaataacatgactcctggaagatatgggaatcct
ccaaggcaacgtgttggtggattttga
DBGET
integrated database retrieval system
