Nicotiana tabacum (common tobacco): 107815480
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Entry
107815480 CDS
T04643
Name
(RefSeq) autophagy-related protein 16-like
KO
K17890
autophagy-related protein 16-1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107815480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107815480
03029 Mitochondrial biogenesis [BR:
nta03029
]
107815480
Membrane trafficking [BR:
nta04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
107815480
Others
Specific organelles associated proteins
Auto phagosome
107815480
Mitochondrial biogenesis [BR:
nta03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107815480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
ATG16
Beta-prop_SCAP
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_SPT8
WDR54
eIF2A
Cytochrom_D1
Beta-prop_Vps41
WD40_RFWD3
Ge1_WD40
Beta-prop_DCAF12
B-prop_COPA_B_2nd
PQQ_2
Motif
Other DBs
NCBI-GeneID:
107815480
NCBI-ProteinID:
XP_016496549
UniProt:
A0A1S4C6J8
LinkDB
All DBs
Position
Un
AA seq
509 aa
AA seq
DB search
MSYEEVAVGAIRDALKALRKRHLVEEGAHAPAFLALTRPLVLQGSEWKEKAENLEVELQQ
CYKAQARLSEQLVVEVAESRASKSLVQEKEAIITDLQNELNESRDECSRLTELLTEKTKA
LELIMGEHQELKAQLEAMTLRANNAEAENKTLVDRWMLQKMQDAERLNEANALYEDMLDK
VKATSIEKLARQQVDGVVRQSEDGANFYAESSLPSICKQRIPAHDGGCASILFEYNSSKL
ISGGQDRAIKMWDTTSGSLSSSLYGCLGSVLDLSITHDNKYIIAASSSNNLYVWDANSGR
IRHTLTGHVDKVCAVDVSKFSSRYVVSAAYDRTIKIWDLQKGYCTNTIIFHSNCNSLSFS
MDGLTICSGHVDGSLRLWDIQTGKLLSEVAAHSQAVTSVSLSRNGNVILTSGRDNLHNLF
DIRTLEICGTFRANENRVASNWSRSCISPDDSYVASGSVDGSVHIWSVSNTKMVSTLKEH
TAPVLCCSWSGFGKPLATSDKSGIICIWS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacgaagaagttgctgttggagcaattagggatgcattaaaggctctaagaaag
cggcatttagtggaggaaggggctcatgcccctgctttccttgccctcactaggcctctc
gttttgcagggttcagagtggaaagagaaagctgaaaatcttgaagttgaacttcagcaa
tgttacaaagctcaagcacgactgtcagagcagcttgtggtggaagtagctgaatcaaga
gcttcaaaatctttagttcaagagaaggaagctatcattactgaccttcagaatgagcta
aacgaatcaagggatgaatgttctcgtttaactgaacttctcacagaaaagactaaagct
ttggaattgattatgggtgagcaccaggagcttaaagcacaacttgaagcaatgactctg
agagcaaacaatgctgaggcagaaaataaaacgttggttgatcgttggatgctgcagaag
atgcaggatgctgagcgccttaacgaggctaatgctctctacgaagatatgctggataag
gtcaaggccaccagtatagaaaaacttgctcgtcaacaagtggatggtgtggtccgccaa
agtgaagatggtgcaaacttttatgcagaatcttcccttcctagtatatgcaaacaaaga
atccccgcccatgatggtggatgtgcctcgattctttttgagtataactccagtaaattg
ataagcggtgggcaggaccgggcaattaaaatgtgggatactacaagtggatcattaagc
agcagtctttacggttgtctgggttctgtccttgatctttccattacacatgataacaaa
tacatcattgcagcaagtagttcaaataacttgtatgtgtgggatgcaaattcaggcagg
atacgacatactcttactgggcatgtagacaaagtttgtgctgtagacgtgagcaaattt
tcaagtcgatacgtggtgagtgctgcgtatgatcgtaccataaaaatttgggatctgcag
aagggttactgtactaacactattatcttccacagtaactgtaatagcctttcgtttagc
atggatggcctgaccatttgttccggtcatgtcgatgggagtcttagattatgggatatt
cagacagggaagcttctgagtgaagttgctgcacattcacaggctgttacatcagtttca
ctctctcgaaatggaaatgtaatattaaccagtgggagagacaacttgcacaatctattt
gatattcgtacccttgaaatttgtggcactttcagagcgaatgaaaatcgagttgcatct
aattggagtcgttcctgtatcagtccagatgacagttatgttgcttctggttctgttgat
ggatctgttcatatttggtcagtatcaaacactaaaatggtaagcactttgaaagaacac
acggcccctgttctatgttgttcatggagtggttttggtaaacctctggctacctcggat
aagagtggaatcatatgtatttggtcataa
DBGET
integrated database retrieval system
