Nicotiana tabacum (common tobacco): 107815909
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Entry
107815909 CDS
T04643
Name
(RefSeq) rhamnogalacturonate lyase-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107815909
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107815909
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
107815909
NCBI-ProteinID:
XP_016497046
UniProt:
A0A1S4C7H2
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Position
Un
AA seq
586 aa
AA seq
DB search
MEKRFPESRRGYWDTMWKLPEDKASTFDTFFATNFRVIAKDNNKVEVSFTKTWNPNADHD
LPLNIDKRFVMLRGSSGFYSYGIFERPEGMPELRLDEARIAMKLRQNLFLYMAVSDDRQR
VMPTDQDRSSGKVLGFREAVRITHPSNPKLKNEVDDKYQYSSDDNDIKVHGWICNRPHVG
FWVITPTNEYRSGGPMKQDLTSHAGATSLATFFSGHYAGPELGVSLKEGEPWKKVFGPVF
FYLNSDSGNNHSTLWEDAKRQMFEETAKWPYDFPESKDYPKANERGTISGRLLVDDRYIS
NDPIFAKSAYIGLALPGDTGSWQTETKGYQFWTQADETGYFKITGIIPGTYNLYSWVPGV
IGDYKYNQTLAITQGSEINLGHLIYNPPRNGPTLWEIGIPDRTAAEFFVPDPLPGFTNRV
LSNSTQKFRQYGLWDRYTDLYPDEDLIYKVGVSDYTKDWFYAHVTRRTENKKYIPTTWQI
SFELPTVDPSGTYTLHVALASATYSHLQGRINNPDRPRPNFETPGIGRSNAIARHGIHGL
YSLFSFQIPEYELQNGQNIIYLKQVKGGSPFNGVMYDYIRLEGPPQ
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaagatttccagaatcaaggagaggatactgggataccatgtggaaacttcca
gaagacaaggctagcacttttgatacgttttttgcaacaaatttccgagttatagcaaaa
gataataataaagtcgaagtttcttttacaaaaacttggaatcccaatgctgaccatgat
cttcctctaaacatcgacaaaaggtttgtgatgctgcgaggaagttctggattctattca
tatggaatatttgaacgtccagaaggaatgccagaacttaggctagatgaagccaggatt
gcaatgaaactcagacagaatttgttcctttatatggctgtatcagacgataggcaaagg
gtaatgccaacagatcaagatcgttcatctggcaaagtccttggcttcagagaagctgtt
agaataacacatccatccaaccctaaactcaagaatgaggttgatgataagtaccaatat
tcgtccgatgataacgatatcaaggtacatggatggatttgcaatcgtcctcatgtaggg
ttttgggtgattacaccaaccaatgaatatcgtagtggtggaccaatgaagcaagatctt
acttctcatgccggtgcaacatccttagcgacatttttcagtggacattatgcaggtcca
gaattaggagtcagtctcaaagaaggagagccatggaaaaaagtatttggtcctgttttc
ttttatctcaactcagattctggtaacaaccatagcacactttgggaggatgctaaaaga
cagatgtttgaagaaactgcaaaatggccatatgatttcccagaatcaaaagactatccc
aaagccaatgaacggggcacaattagtgggcgattattggtcgatgacaggtacataagc
aatgatcctatttttgcaaaatctgcatatattggattggctctccctggagatactgga
tcatggcaaacagagaccaagggttatcaattttggactcaagcagatgagaccggatat
tttaagattactggaattatacccggaacttataatttgtactcatgggtccctggagtt
attggagattacaaatacaaccaaactttggccattacccaaggaagtgaaattaatcta
ggtcatttaatttataaccctccaagaaatggtccaactctatgggaaataggcattcct
gatagaactgctgctgaattctttgtccctgatccattgcctggcttcactaaccgcgtc
ctcagcaacagtacacaaaagtttagacaatatggtttatgggatcgttatacagattta
tatcctgacgaagatttaatatacaaagttggtgttagtgattacacaaaggattggttc
tacgctcatgtaaccaggagaactgaaaacaagaaatatataccaacaacatggcaaata
tcatttgaacttccaactgtggatccaagtggaacttacacactccatgtggcattggct
tctgccacgtactcccatttgcagggaagaataaacaaccctgatagaccaaggccaaat
tttgaaaccccaggaattgggaggagtaatgcaatagcaagacatggaattcatggatta
tacagtcttttcagttttcaaattccagaatatgaattacaaaatggacaaaatatcata
tatttaaagcaagttaaaggtggtagtccttttaatggagtcatgtatgattatattcga
cttgaaggccctccacagtaa
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