Nicotiana tabacum (common tobacco): 107815909
Help
Entry
107815909 CDS
T04643
Name
(RefSeq) uncharacterized protein LOC107815909
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107815909
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107815909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
fn3_3
CBM-like
RhgB_N
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
107815909
NCBI-ProteinID:
XP_016497046
UniProt:
A0A1S4C7H2
LinkDB
All DBs
Position
16:complement(164308523..164317497)
Genome browser
AA seq
609 aa
AA seq
DB search
MVNPSSSEYLVHWKGVPFNQGSILKKLGDVDTIRNSDLAYLEMFTAASVLAKAYDSMCFM
IGEMVGKRLQRQTLLWFTIIIQLFSIFTSSRMLHARHTPENDPPVKLHILHHHVIIDNGI
VQLTLSNPTGHIAGVSYKGIDNLMEKRFPESRRGYWDTMWKLPEDKASTFDTFFATNFRV
IAKDNNKVEVSFTKTWNPNADHDLPLNIDKRFVMLRGSSGFYSYGIFERPEGMPELRLDE
ARIAMKLRQNLFLYMAVSDDRQRVMPTDQDRSSGKVLGFREAVRITHPSNPKLKNEVDDK
YQYSSDDNDIKVHGWICNRPHVGFWVITPTNEYRSGGPMKQDLTSHAGATSLATFFSGHY
AGPELGVSLKEGEPWKKVFGPVFFYLNSDSGNNHSTLWEDAKRQMFEETAKWPYDFPESK
DYPKANERGTISGRLLVDDRYISNDPIFAKSAYIGLALPGDTGSWQTETKGYQFWTQADE
TGYFKITGIIPGTYNLYSWVPGVIGDYKYNQTLAITQGSEINLGHLIYNPPRNGPTLWEI
GIPDRTAAEFFVPDPLPGFTNRVLSNSTQKFRQYGLWDRYTDLYPKEDLVYKVGASDYRN
DWFYAHVTR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggttaatcctagctcaagtgaatacttagtacattggaaaggagtgccttttaatcag
ggttcgatcctgaaaaaattgggggatgttgatacaattagaaattcagatttagcttat
ctggaaatgtttactgcagcatctgtccttgctaaagcatatgactcaatgtgttttatg
ataggagagatggttggaaagaggctacaacgacaaacattattatggtttacaattatt
atccagcttttctcgattttcactagttcgaggatgctgcatgctaggcatactccagag
aacgatcctccagtcaaattgcacatcttacatcaccatgtgataatagataatggcatc
gttcaacttaccctatcaaatccaacgggacacattgctggggtaagttacaaaggcatt
gataatctcatggagaaaagatttccagaatcaaggagaggatactgggataccatgtgg
aaacttccagaagacaaggctagcacttttgatacgttttttgcaacaaatttccgagtt
atagcaaaagataataataaagtcgaagtttcttttacaaaaacttggaatcccaatgct
gaccatgatcttcctctaaacatcgacaaaaggtttgtgatgctgcgaggaagttctgga
ttctattcatatggaatatttgaacgtccagaaggaatgccagaacttaggctagatgaa
gccaggattgcaatgaaactcagacagaatttgttcctttatatggctgtatcagacgat
aggcaaagggtaatgccaacagatcaagatcgttcatctggcaaagtccttggcttcaga
gaagctgttagaataacacatccatccaaccctaaactcaagaatgaggttgatgataag
taccaatattcgtccgatgataacgatatcaaggtacatggatggatttgcaatcgtcct
catgtagggttttgggtgattacaccaaccaatgaatatcgtagtggtggaccaatgaag
caagatcttacttctcatgccggtgcaacatccttagcgacatttttcagtggacattat
gcaggtccagaattaggagtcagtctcaaagaaggagagccatggaaaaaagtatttggt
cctgttttcttttatctcaactcagattctggtaacaaccatagcacactttgggaggat
gctaaaagacagatgtttgaagaaactgcaaaatggccatatgatttcccagaatcaaaa
gactatcccaaagccaatgaacggggcacaattagtgggcgattattggtcgatgacagg
tacataagcaatgatcctatttttgcaaaatctgcatatattggattggctctccctgga
gatactggatcatggcaaacagagaccaagggttatcaattttggactcaagcagatgag
accggatattttaagattactggaattatacccggaacttataatttgtactcatgggtc
cctggagttattggagattacaaatacaaccaaactttggccattacccaaggaagtgaa
attaatctaggtcatttaatttataaccctccaagaaatggtccaactctatgggaaata
ggcattcctgatagaactgctgctgaattctttgtccctgatccattgcctggcttcact
aaccgcgtcctcagcaacagtacacaaaagtttagacaatacggtttatgggatcgttac
acagatttatatcctaaggaagatttagtatacaaagttggtgctagtgattatcgtaac
gattggttctacgcccatgtaaccaggtaa
DBGET
integrated database retrieval system
