Nicotiana tabacum (common tobacco): 107815910
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Entry
107815910 CDS
T04643
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107815910
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107815910
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Paralog
GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
Rhamnogal_lyase
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
107815910
NCBI-ProteinID:
XP_016497048
UniProt:
A0A1S4C7C5
LinkDB
All DBs
Position
Un
AA seq
475 aa
AA seq
DB search
MPTAKDREMGRELDYPEAVLLTSPTNSFLKGEVDDKYQYSLEDKDNRVHGWISPNPRTGF
WMITPSNEFRTGGPVKQDLTSHTGPITLSMFFSTHYGGDILALRFRNGEPWKKVFGPVLI
YLNSVSSDDEDILTLWTDAKEQMLIETENWPYDFPLSQDFVQADQRGTVSGRLLVSDSYV
SKRLITANSAFIGLAAPGDVGSWQTENKGYQFWTQTDNEGYFLIKSIIPGNYSLYAWVPG
FIGDYKYKNYINITPGSRTRLQTLMYNPPRNGPTLWEIGIPDRTAAEFFIPNPQPKLQNQ
LYIEHYAEKFRQYGLWDRYTELYPNDDLIYTVGSSNYQTDWFFAHVNRYTFNDEGNKTYI
PTTWQIAFDLQEVEKPSNYTLQLALASTNEAELQIRVNDQDADHVPNFTTGLIGKDNAIA
RHGIHGLYWLYSIDVPGSVFATGKNVIFLKQSRGSSPWSGLMYDYIRLEGPPAND
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcccacagctaaagatcgagaaatgggccgagaacttgattacccagaagcagtactt
cttacaagcccaactaattctttcctcaaaggagaggtggatgataagtatcaatactct
cttgaagacaaggataatcgggtccatgggtggataagcccaaatccaagaactggattt
tggatgattacacctagtaatgagttcagaacaggtgggcctgttaaacaagacctcacc
tctcacaccggcccaataactttatctatgtttttcagcacacattatggtggagatatt
ctagcactaagatttcgaaatggagagccctggaaaaaggtttttggtcctgttttaatc
tacctaaactctgtttcatctgatgatgaagatattctcacactatggacagatgcaaag
gaacagatgttaatagaaaccgaaaattggccatacgatttccctctgtcgcaagatttt
gttcaagctgatcaacggggtactgtaagtggcagattactcgttagcgacagctatgta
agtaaaagacttatcactgcaaattctgctttcattgggttggctgcacctggagatgta
gggtcatggcaaactgaaaataagggttatcaattttggactcaaacagataatgaggga
tattttttaattaaaagtatcatcccaggcaattatagcttatatgcttgggttcctgga
tttattggcgattacaaatacaagaactacatcaacattaccccaggatcaagaactagg
ctgcaaaccctaatgtataaccctccaaggaatggaccaacattatgggaaataggtatt
ccagatagaactgcagcagaattcttcattccaaatccacaaccaaaactccaaaaccag
ttgtacatcgaacattacgcagaaaagtttaggcaatatggattatgggatcgttacaca
gaactataccctaatgatgatttaatctacactgttggatcaagcaactatcaaacagat
tggttctttgctcatgtaaatagatatactttcaatgatgaagggaataaaacatatata
ccaacaacatggcaaattgcgtttgatcttcaagaagtggagaagccctcaaattataca
cttcagctagcattggcttcaacaaatgaagctgaattgcaaattcgagtaaacgatcaa
gatgcagatcatgttcctaacttcacaacagggttgataggcaaggataacgcgattgca
agacatggaattcatggcttgtattggttgtatagtatagatgtccctggatctgttttt
gctactggaaaaaatgttatatttctaaagcaaagtagaggttcaagcccctggagtgga
ctaatgtatgattatattcgtcttgaaggccctcctgcaaatgattaa
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