Nicotiana tabacum (common tobacco): 107816023
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Entry
107816023 CDS
T04643
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107816023
03036 Chromosome and associated proteins [BR:
nta03036
]
107816023
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107816023
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Pre-60S particles
Helicases
107816023
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107816023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
Cas3-like_C_2
FlpD
Motif
Other DBs
NCBI-GeneID:
107816023
NCBI-ProteinID:
XP_016497180
UniProt:
A0A1S4C7R7
LinkDB
All DBs
Position
Un
AA seq
692 aa
AA seq
DB search
MPALAVTETMVSEVSQKKMKKTPKSPADTHDLETPADKKSKEKKSKKTKIDSGSDSEELK
KSKKKEKKRKALDFDDEEEQKSETSSEICEPIDEKNRKKNKNAKLEEEEVVVEKKVEDPN
VLSNFRISKPLREALNAKGIEALFPIQAMTFDDILDGSDLVGRARTGQGKTLAFVLPILE
SLTNGPTKALRKTGYGKAPSVLVLLPTRELALQVFADFEVYGRAMGLTSCCLYGNSPMGA
QQVQLKRGVDIVVGTPGRIKDHIERGNLDFRSLKFRVLDEVDEMLKIGFVDDVELILGKV
EDASQVQTILFSATLPDWVKHIASKFLKPDKKTVDLVGNEKMKASKNVRHIIIPCSSSAR
SQLIPDIIRCYSSGGRTIIFTETRGYASELAGLLPGASALHGEIQQSQREVTLKGFRSGK
FMTLVATNVAARGLDIDNVQLIIQCEATSDVEAYIHRSGRTGRAGNTGVAVLLYDPRKSN
ISRIERESGVKFEHLSAPQPADVAKAAGKEAADIIAEISDSVIPAFKAAAEELLNTSDLS
PAELLAKALAKAAGYSEIKTRSLLTSMENCVTLLLECGRPIFSPSFVYSVLRRFLPGEKV
ESINGLTLTADGKGAVFDVSAEDLDQFLAGQKTAHGVNLEVVEALPQLQEREKPRGGRFG
GGGRGGFSNRRGGGGFSGGRGGRGNGNFGRRW
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcacttgctgtaactgaaacaatggtctccgaagtatcccagaagaaaatgaag
aagacccccaaatctcccgccgacacccatgatttagaaactcctgctgataagaaaagc
aaagaaaaaaagtcgaaaaagaccaagattgattctgggtctgattcagaggagctgaag
aagagcaaaaagaaagagaaaaagcgaaaagctttggactttgatgatgaggaagagcag
aagagtgaaacgagctccgagatatgcgagccgatagatgagaagaataggaagaagaat
aagaacgctaaattggaggaggaagaagtggttgttgagaagaaagtggaggatcctaat
gtgttgtctaattttaggatttcaaagcctttaagagaggctttgaatgctaaaggaata
gaagcacttttccctattcaagctatgacttttgatgatattcttgatgggtcggatttg
gttggacgagctcgtactggtcagggtaaaacactggcatttgttttgcccatattagag
tccctaacaaatggtcctactaaagcattgcgaaaaacaggatatgggaaggctccaagt
gttctggtgcttttacctactagggaattggcacttcaggtgtttgcggactttgaagtt
tatggccgggctatggggctcacttcatgctgtttgtatggaaattctcccatgggagca
caacaggttcaactaaaaagaggagttgatattgtagttggtactcccggaagaattaag
gaccacattgaaaggggaaatcttgatttcaggtctttaaagtttcgtgttcttgatgaa
gtcgatgaaatgttaaaaattggttttgtagatgatgtcgaacttattttaggcaaggtt
gaagatgcaagccaagttcaaacaattcttttcagtgccactttgccagactgggtgaag
catattgcttctaagtttctgaaacctgataagaaaacggttgaccttgttggtaatgag
aaaatgaaggccagtaaaaatgtgaggcatattattattccatgctctagttctgcaaga
tctcagctgattcctgatatcattcggtgctacagcagtggaggccgcactataattttt
actgagacaagggggtatgcttcagagctagctggcttgttgcctggggcaagtgctttg
catggggagatacaacagtcacagcgtgaggttacacttaaaggattcagatcaggaaaa
ttcatgacattagtggccacaaatgtggctgcccgtggattggatattgacaatgttcag
ttaatcatccagtgcgaagcgactagtgatgttgaagcatatattcatcgatctgggagg
acaggacgggcaggaaatactggtgttgctgtacttctgtatgatccaaggaagtccaac
atctctagaattgaaagagaatctggtgtgaagtttgagcatttgtctgctccacagcca
gctgatgttgctaaagcagctgggaaagaagctgctgatataattgctgaaatctccgat
agtgtcatacccgcatttaaggctgctgcggaggagcttctgaatacttccgacctatca
ccagcagagttgcttgcgaaagctcttgccaaggctgctgggtattctgagatcaagact
cggtcgcttcttacttctatggagaactgtgttactctgcttcttgagtgtgggaggccc
atattctcaccttcctttgtctatagtgtcttgaggaggttcctacctggggagaaggtt
gaatcaatcaacggtcttactttgacggccgatggaaagggggcagtttttgatgtatct
gctgaggacttggaccaatttcttgcaggccaaaaaactgcacatggcgtaaatttagag
gtagtggaagcgttgcctcagttgcaagagagagagaagccaagaggtggaagatttgga
ggtggtggtcgtggtggcttctctaacagaagaggcggaggtggcttttctggaggaaga
gggggaagaggtaatggtaactttggtcgcagatggtaa
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