KEGG   Nicotiana tabacum (common tobacco): 107816106
Entry
107816106         CDS       T04643                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03020  RNA polymerase
nta03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107816106
  09124 Replication and repair
   03420 Nucleotide excision repair
    107816106
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nta03021]
    107816106
   03400 DNA repair and recombination proteins [BR:nta03400]
    107816106
Transcription machinery [BR:nta03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     107816106
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107816106
SSDB
Motif
Pfam: RNA_pol_Rpb4 TRF
Other DBs
NCBI-GeneID: 107816106
NCBI-ProteinID: XP_016497278
UniProt: A0A1S4C808
LinkDB
Position
Un
AA seq 138 aa
MSLEEEENAAELKIGDEFLKAKCLMNSEVSLILEHKYEQIQQMSDDPSNQVSQVFEKSLQ
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRMLD
EEAIEKMLNDLSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctttggaagaagaagaaaatgcagccgaactcaaaattggcgacgagtttttgaag
gccaagtgtctaatgaactccgaagtttctttgattcttgaacacaagtatgagcagatt
cagcagatgtctgatgatccgagcaatcaagtttcacaagtgtttgagaagtcactgcag
tatgtgaagcgtttcagccggtacaagaatcctgatgccgttagacaagttcgagaaatc
cttagcagatatcaacttgctgaattcgagctgtgtgtcctggggaatctttgtccagaa
actgttgaggaagctattgccatggtcccatctataaagaatagaggtcgcatgcttgat
gaggaggcaatcgagaaaatgctgaatgatctctccctgataaagaagtttgagtag

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