KEGG   Nicotiana tabacum (common tobacco): 107816187
Entry
107816187         CDS       T04643                                 
Name
(RefSeq) THO complex subunit 7A
  KO
K13176  THO complex subunit 7
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03013  Nucleocytoplasmic transport
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107816187
  09122 Translation
   03013 Nucleocytoplasmic transport
    107816187
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107816187
   03041 Spliceosome [BR:nta03041]
    107816187
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     107816187
Spliceosome [BR:nta03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107816187
SSDB
Motif
Pfam: THOC7 SAB APG6_N ArsR YwqH-like ARM_LIN MG280 Spectrin DUF4094 DUF1192
Other DBs
NCBI-GeneID: 107816187
NCBI-ProteinID: XP_075095680
LinkDB
Position
19:complement(5381631..5400478)
AA seq 242 aa
MLARGRKVAGKGETVAAHYAFGPLEDDFIIKHRLLTRTTTTRGEPPLKKLQKKFNAFASE
VEKEADNYGDCEKLAKAFLQELNTFEIPLLKSKAVIDANLREKENFNDLKDEINGQILQA
QADIEDLKRQLEESKIERQHKEECEAIRKLVAMQPPRSETQKVITDLEKEIAMLEAENTA
SSRTLELRKKQFALLLHVVDELQNTIEEEHRILVEEMRNAVDDHSKSGLEDATGGLEAMA
VD
NT seq 729 nt   +upstreamnt  +downstreamnt
atgttggccagaggcagaaaagttgctgggaagggggagacagtggctgcacattatgct
tttggcccacttgaagatgattttattattaagcatagacttcttactcgcacaacaacc
accagaggcgaaccgccgttgaagaaacttcagaaaaagtttaatgcttttgcttcggag
gtagagaaggaagctgataactatggcgattgtgaaaaacttgccaaagcttttttgcaa
gagctaaatacgtttgagattccgctcctaaagagcaaagcagtcatagatgcaaacctt
agagagaaggagaatttcaatgacctgaaagatgagataaatggacaaatattacaagct
caggccgatatagaagatctcaagaggcaacttgaagaaagcaagatagagaggcagcat
aaagaagagtgtgaggccatcaggaagttggttgcgatgcagcctccaagatctgaaact
cagaaagttattacagaccttgagaaagagatagccatgttggaggcggagaatactgct
agttcaagaacattagagcttcgtaaaaagcaatttgcgcttctattacacgtggttgat
gagttgcagaacacgatagaggaagaacataggattttggttgaagagatgaggaatgca
gttgatgatcatagtaagagtgggctggaagatgctactgggggtcttgaagcaatggct
gtggattag

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