Nicotiana tabacum (common tobacco): 107816261
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Entry
107816261 CDS
T04643
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107816261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107816261
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107816261
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
107816261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
107816261
NCBI-ProteinID:
XP_016497446
UniProt:
A0A1S4C8L2
LinkDB
All DBs
Position
Un
AA seq
325 aa
AA seq
DB search
MRGVQLPFSNTQKLRYERALAQLESLSSKVNTNATVIVADTIPVDEDGALKGHGTLDMGK
NVVATVCGVVERVNKLVYVRSLRARYKPEIGDIIVGRVIEVAPKRWRLEINFSQDAVLML
SSMNLPDGIQRRRTAIDELNMRTIFVENDVICAEVRGFQHDGSLHLQARSQKYGKLERGR
LLTIPPYLVKRRKQHFHHLDQYGVDLILGCNGFIWIGEHVEVKDAMVEDQVNKSDPENTH
SGSLPDSSEEPTSTPPETRQYICRIANAITVFAALDFMVTLEGVIEMVNLSLSLNLGVDE
MLNAEFHVQVAEKEAERRSTLTKRR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcgtacaactacctttcagcaacacccaaaagctaagatacgaaagagcattg
gcgcagttggaatccctttcttcaaaagttaataccaatgccactgtcattgtcgctgac
accatccccgtcgacgaagatggcgccctcaagggacacggtacattggatatgggcaag
aatgtggtagcaactgtctgtggagtggttgagcgcgtgaataagcttgtctatgttcga
tctttaagggccaggtataagccagaaattggtgatattatagttggccgtgttattgag
gttgctccaaagagatggagattggaaattaatttcagccaagacgccgtactaatgctc
tcttcaatgaatctgccagatggtattcagaggaggcgaactgcaattgatgaactcaat
atgcgaaccatattcgtggagaatgatgtcatctgtgctgaagtccgtggtttccagcat
gatggcagtctacacctccaagctagaagtcaaaagtatggaaagcttgaaagagggcga
ctactcacaatccctccatatctagtgaagaggcgtaaacagcatttccaccatctagat
cagtatggagttgacttgatacttggctgcaatggatttatttggattggggaacatgtt
gaagtaaaagatgccatggtagaggatcaagtaaataagtctgatccagagaacacccat
tcaggaagcttaccggattctagtgaagaaccgacttctacaccaccggaaacaagacaa
tatatatgcaggatagcaaatgccatcacggtattcgctgctttagacttcatggttact
ttggagggtgtaatagagatggttaacttgagcttgtctttgaaccttggtgtggatgag
atgcttaacgcagaattccatgttcaagttgctgagaaagaagctgaacgacggagcacg
ttgacaaaaagaagatag
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integrated database retrieval system
