Nicotiana tabacum (common tobacco): 107816280 Help Entry 107816280         CDS       T04643                                  Name (RefSeq) symplekin-like   KO K06100   symplekin Organism nta  Nicotiana tabacum (common tobacco) Pathway nta03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:nta00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     107816280  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:nta03021]     107816280    03019 Messenger RNA biogenesis [BR:nta03019]     107816280 Transcription machinery [BR:nta03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      107816280 Messenger RNA biogenesis [BR:nta03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      107816280     U7-dependent histone pre-mRNA processing factors      107816280 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N HEAT_EZ HEAT_2 Adaptin_N Motif Other DBs NCBI-GeneID:  107816280 NCBI-ProteinID:  XP_016497472 UniProt:  A0A1S4C8A2 LinkDB All DBs Position Un AA seq 1335 aa AA seqDB search MVGMMSPISRERIASLLNAAKFXLSAAKFASDVPSKLHSLRRLNNELAGADSQLLSEFLP SLLDLVSDRFSPVRKLTAEMVGYIGFKHGEFIPDIVPVLISALKDDMPAVARQAITCGID IFRCTLVKVAIQGLFSSELDDSLESAWAWVLKFREEIYAMAFQPASDGRRLLALKFVESV VLLYTPNPSVSSEPPPALDIEGKFEQFNVSWLRGGHPILNVGDLSVEASQSLGLLLDQLR FPAVKSITNLMIIVLINCLSAIATKRPAFYGRILPVLLSLNPSSSDGNAKHVSGVYHALK NAFVSCLNCTHPGAAPWRDRLEGALREKRAGVQAEPVVSHDSQNNGHIELKDVSSIPEES KPSVKASDSGQSIAGTKRSGVEDNAELVDDNLSKKRMRSAPIVLKEPKQELSANQERVST GGSTTTRPDGDNVHLQPLVAMFGTLVAQGEKAAASLDILISSISADLLADVVMANMRNLP SNQPKVDDDEEPPLKPEIESDFKQLSSLLSDVVSQSSMLAEKDEKDAQNLVFIEPELQQI KEGDEHLDSVTTNVTSDALNYASEQAPEYVTEPLSSKSTPLLMENDVSPMQSDVADIENN EDFIPGLDSVVRKDVSSELVVVSSVDPTELEDGSQEQGSSLVRSSLEVVPSISTDRSEEL SPKAAVTDVTSVNSSTAASVGLSPQLLLPKISAPVIHLPDEQKDNIQKSAFTRVIDAYKQ VTVAGGSQTRFSLLAYLGVEFSSELNPWKFLQTHILSDYMNHEGHELTLRVLYRLYGRAE EDQDFISSTAAASVYETFLLTVAETLRDSFPASDKSLSRLLGEAPHLPNSVLKLLERLCC PGSSEKDEKELHSGDRVTQGLSTVWNLILMRPPMREACLRIALQSAVHHLEEVRMKAIRL VANKLYPLTSISQQIEHFANEMLMSVSTVDHKADSNGDGSSPALQKDSASEKPTEEGPSF SITTKDVSSDTLQSSTAGSISPFSIAEGQRCMSLYFALCTKKHSLFGQIFVVYSRASEAV QQAIHQQIHMLVRTIGSSSELLEIISDPPSGSEKLLMQVLQTLTEGTVPSLQLITTIRKL YETKVKDVELLIMILPFLSKDEVLLLFPHVVNVPLDKFQGALSRILQGSAHSGPVLTPAE ALIAIHRIDPEREGIPLKKVTDACNACFEQRQTFTHQVLAKVLNQLVEQIPLPLLFMRTV IQAIGAFPSLVDFIMEILSRLVSKQIWKYPKLWVGFVKCALLTKPQSFGVLLQLPPAQLE NALSRTPGLRAPLVAHANQPHIKSSLPRSVLTVLGIESDAQGSSQAPPNQSQTGDMGNSD KEALTEKSRESSIAS NT seq 4008 nt NT seq  +upstreamnt  +downstreamnt atggtgggaatgatgtctccgatttcacgagaaaggatagcgagtttactcaacgctgcc aagttcntactcagcgctgccaagtttgcttccgatgttccgtcgaagcttcacagcttg cgccggttaaataatgaactcgccggcgccgactctcagttgctctctgaattcctccct tctctccttgacctcgtatctgatcggtttagccctgttcgtaaattaaccgctgagatg gttggttatattggattcaaacatggagaattcatacctgatattgtacccgtgttgatc tctgccttgaaggatgatatgccagctgttgctcgacaagcaatcacttgtggaattgat atatttcggtgtactctagtcaaagttgcaatccagggcttgttttcaagtgaattggat gattctcttgaatcagcatgggcctgggtgctgaagtttagggaggagatatatgcaatg gcatttcagcctgcaagtgatggaagaagattgcttgcgctgaagtttgtggaatctgtt gtgctactttacactccgaatcccagtgtcagttcggagccaccgcctgctttggacatt gaagggaagtttgaacaattcaatgtttcgtggcttcgtggaggtcatccaatactaaat gttggggatttgtctgttgaagcaagtcaaagtttgggtctattgcttgatcagcttaga tttcctgcagtgaagtcaattactaacttgatgatcattgtgctcattaactgtctttca gcaattgcgactaaaaggccggctttttatggtcgtattctgccagttctacttagcctg aatccttcaagctccgacggcaatgcgaagcatgtttctggggtataccatgctttgaag aatgcctttgtttcttgcttgaattgtacacacccaggagctgcaccgtggcgggacaga ctagaaggtgcactcagagaaaagagagcaggagttcaggcagaaccagttgtaagccac gattcccagaataatggacacatagagttgaaggatgtttcatcaatcccagaggagtca aagccttcagttaaagcatcggatagtggacaaagcattgctggaacgaaaagatcaggg gtggaggacaatgctgaactggtagatgataatctctctaagaagcgcatgcggtcggca cctattgtcttaaaggaaccaaagcaagagctaagtgcgaaccaggagagagtttcaact ggaggttctacaacaaccagaccagatggagataatgttcatttgcaaccacttgttgca atgtttggtacattagttgcccagggtgaaaaggctgcagcatcattagatattttaatc tctagcatatcagctgacttactagctgatgttgtgatggctaatatgagaaatctacct tcgaatcagccaaaagttgatgatgatgaagagccacctctgaagccagaaattgaatct gattttaaacaattatcatcactgttgtcagacgtcgtttctcagtccagtatgttagca gaaaaagacgagaaagatgctcaaaatttggtcttcatcgagccggagttgcagcaaatt aaagaaggagacgagcaccttgattctgtcactactaatgttacatctgatgccctgaat tatgcaagcgaacaagcaccggaatatgtaactgagcctctttcttcaaaaagtacccct ctgctaatggagaatgatgtctcaccaatgcaatctgatgttgctgacattgaaaacaat gaggatttcatacctggtctagattctgtagttcgcaaagatgtttcatcagagctcgta gttgtttcatcagttgatcccactgaacttgaggatgggagccaagagcaagggtctagt ttagtgaggtcatctttggaggtagttccatcgatttcaactgataggtctgaggagctt agtccaaaagcagcagtaacagatgtaaccagcgtaaactcatcaacggcagcttctgtt gggctttctccgcagttgcttctacccaaaatatctgctccagtcatccacctacctgac gagcagaaggataatatacaaaagtcagctttcactcgtgtcattgatgcttataagcaa gttacagttgctggaggttctcaaacccgcttttctcttcttgcctatttaggtgttgag ttttcttcggagctaaacccttggaaatttctacaaacacatatattgtcagattatatg aatcatgaggggcacgagttgacattgcgtgtcctctacaggttgtatgggcgtgcagaa gaagaccaggatttcatttcttcaacagctgctgcatctgtatatgaaacatttctactt acagtggcagaaacacttagagattcttttccagcttctgacaaatctctaagtagattg cttggtgaagctcctcacttaccaaattctgttctcaagttgttagagaggttatgttgt cctggtagttctgaaaaggatgagaaggagttacatagtggagatcgagtcactcaaggc ctcagtactgtgtggaacctgattctgatgagacctccaatgagagaggcctgtctcaga attgctttacagagtgctgttcatcacttggaggaggtgcgcatgaaggcaatacggctg gtcgccaataagctttatcctctgacatccatctctcaacaaatagagcactttgccaat gaaatgttgatgtcagtttcaaccgttgatcataaagcagattcaaatggtgatggatct agtcctgccttgcagaaggattctgcttcagaaaaacccacggaagaaggaccatcattt tccatcaccaccaaagatgtgtcctctgacactcttcagtcatccactgctggaagcata tcaccgttttcgatagctgaaggccagcggtgcatgtcgctctattttgcactgtgtact aagaagcactcactttttggccaaatatttgttgtatatagccgtgcatccgaggctgta cagcaggcaatacatcaacaaatccatatgctagttcggacaattggttcttcatctgag ctacttgagatcatatcagatccaccaagtggaagtgaaaagctattgatgcaggttttg caaacgttgaccgaggggacagttccttccttacagttgataactactatcaggaagcta tatgagactaaagtaaaggatgttgaacttcttattatgatacttcctttcttgtcaaaa gacgaggttttgctgcttttcccacatgttgtgaatgttccattggataaattccaaggt gctctgtctcgtattctacagggatcagctcactcaggtccagtgctaactcctgctgaa gcattaattgctatccataggattgatcctgaaagagaaggcattccattgaagaaggtc acagatgcatgcaatgcttgttttgagcagagacagacgttcacgcatcaggttcttgca aaggtcttgaaccaattggtcgaacaaattcctcttccgttgctgttcatgcggactgta atacaagctattggtgcttttccatctctggtggatttcataatggagatcctctctcgt cttgttagtaaacagatatggaaatacccgaagctgtgggtaggatttgtgaaatgtgcc cttttgaccaagccacaatctttcggagtgctgcttcagctacctccagctcagcttgaa aatgcattgagtagaacgcctggtctcagagctcctttagttgcacatgcaaaccaacca cacataaaatcttcacttccaaggtctgtcttaacggttcttggaattgaatcggatgct caaggttcaagtcaggcacctcccaaccagtctcagacaggtgatatgggcaattctgat aaggaggcactcactgagaaatccagggaatcgtcaattgccagttaa

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