Nicotiana tabacum (common tobacco): 107816385
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Entry
107816385 CDS
T04643
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107816385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107816385
03036 Chromosome and associated proteins [BR:
nta03036
]
107816385
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107816385
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107816385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
107816385
NCBI-ProteinID:
XP_016497581
UniProt:
A0A1S4C8Z6
LinkDB
All DBs
Position
Un
AA seq
773 aa
AA seq
DB search
MSSTPTFGSCSFDMPAVSTSGISGFGGLLIPRPFNESTVEQFGMSSAPRFGSYSFGQPAV
SVSALNPLFSSSNMFGSTPEIGQTQPLFGNRAFGETSSASSVFAQPIGSSVSFNGTTTFN
AANDATAFQTQDKSLGSSTLSTFGKKYEGNGVANKPLLWSRDASVSAPAFGVASNSHFGM
SSTPAFGSYSSVQPAVSTSGISGFGGLVIPRPFDRPAAFVSGKESTAPLLKSFSFGKAAC
GFNQNGSRIASYIATPEKDSTKPGETIQSICGMHTYKDKSQEELRFEDYQLGDKGISGFG
VIDNSRTFQSPVFNQSTVDHPNPFAVKREPSSGHCPNPFAVKREPSYCHCPNPFATKRAG
FDSLSKEKSTTTPPGTGTRVASYAATREVEGQYSIKFLSISAMPLYSNKSHEELRLEDYE
SANKGAASISQSKPFESSSGSTASNVFFSPWIHSSPFAAPLKPDSSSPITSALSPAPILT
TGAAPQSTLCSNCLNKSQSSYQLQPTSPRLCDSSIGLENLTTSSQLYPLGPSQNTPLFVG
PLHPEMTPNVGETLPTAISSHPATENVGMHDGVKVNDSCGKPNLAPEEMHYDNSGKLKPC
FIVSVESAAEEATDSKHDDKDVDAIMPKLQRSDYYTVPPIQELISKEKEEPGFCTHVTDF
VVGRHGYGSIKFLGETDVRKLDLDSAVHFNCREVIIYMDESEKPPVGQGLNKPAEITLLN
VRCINKSTGKEYTDGPIVNKYRDMLIKKAGVHGAEFVSYDPVKGEWAFKVSHF
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcactcccacatttggttcctgctcctttgacatgccagcagtatccacgtca
ggcatatctggatttggtggcctcctcataccaaggcccttcaacgaatcaacagtcgag
cagtttggtatgtcaagcgctccaagatttggttcctactcctttggccagccagcagta
tccgtgtcagctttaaatccgttatttagcagcagcaatatgtttggttctacccccgaa
attggacagactcaaccactgtttggaaatagagcatttggagaaacctcatcagcatca
tccgtatttgctcaacctattggaagttcagtgtctttcaatggaaccacaacatttaat
gcagcgaacgatgctacagcttttcaaacgcaagacaaatctctgggctcgtccacttta
tcaacatttggaaagaaatatgaaggtaatggtgtggccaataaacctctgttgtggtcc
agggatgccagtgtttcagctcctgcatttggtgttgcaagcaactcacactttggcatg
tcaagcactcccgcatttggttcctactcctccgtccagccagcagtatccacgtcaggc
atatctggatttggtggcctcgtcataccaaggccttttgaccggccagcagcatttgtg
tcaggaaaagaaagtacagcaccattgctcaagagctttagttttggaaaggcagcatgt
ggtttcaatcagaatggaagtagaatagcatcatacatcgcaactccagagaaagatagc
acaaaaccaggtgaaacaattcagtccatttgtggcatgcacacttataaagataaaagc
caggaggagttgaggtttgaggactatcagttaggtgataaaggcatatctggatttggt
gtcattgacaactcaaggacttttcaatcaccagtatttaaccaatcaactgttgatcat
ccaaatccatttgccgtgaaaagagaaccttcttctggtcattgtccaaatccatttgcc
gtgaaaagagaaccttcttattgtcactgtccgaatccatttgccacgaaaagagcaggg
tttgattctctatcaaaagagaagtctaccacaaccccacctggcactggaactagagtg
gcatcttatgctgcaactagagaagtggaaggacaatattcaataaagtttttgtcaatc
tctgctatgccattgtattctaataaaagccacgaggagttgaggttagaggactatgaa
tctgcaaacaaaggggctgcatcaatttcacaaagtaaaccatttgagtcttcatcagga
tctactgcctcaaatgtatttttttctccatggatccattcaagtccatttgctgcacct
ttgaaaccagattctagttctccgattacctccgccctttctcccgctcctattttaact
accggagcagctccacaatccacattatgctcaaactgcctaaacaagtctcaatcatcc
taccagctgcagcctacttccccaagactttgtgattcatctattgggttggaaaacttg
actacatcctctcagctctatccacttggtccaagtcaaaatactcctctgttcgttggt
cctctgcacccagaaatgactccaaatgttggagaaacacttcctacagccatctcttct
catccagcaacagaaaatgtagggatgcatgatggagtcaaagttaatgacagttgtggc
aagcccaacttagcgcctgaagagatgcattatgataattctggaaagctgaaaccttgt
ttcatagtttcagttgaaagtgctgctgaagaagcaacagatagcaagcatgatgataag
gatgttgatgccataatgcccaagctccaacgttctgattactacacagttcctcctatt
caggaattaatatcaaaggagaaggaagaacctggtttctgtacccacgtgacggacttt
gtggtaggaagacatggctatggaagcatcaagttcttgggagaaacagatgtccggaag
cttgatcttgattctgccgtccattttaactgtcgtgaagtgatcatctatatggacgag
agcgagaaacctccagttggacaaggcctcaacaagccagctgagataactctccttaat
gtcagatgcatcaacaaatcgaccgggaaggagtacacagatggaccaatagttaacaag
tacagagatatgcttattaagaaagcaggagtgcatggtgcagaatttgtttcttatgat
ccagtaaaaggggagtgggcatttaaagtgtcacacttttag
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