Nicotiana tabacum (common tobacco): 107816643
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Entry
107816643 CDS
T04643
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107816643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107816643
Membrane trafficking [BR:
nta04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
107816643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
107816643
NCBI-ProteinID:
XP_016497860
UniProt:
A0A1S4C9P9
LinkDB
All DBs
Position
Un
AA seq
753 aa
AA seq
DB search
MIATEGIEDEEKWLAEGIAAIQHNAFYMSRALDSNNLREALKYSALLLSELRTSKLSPHK
YYELYMRAFDELRKLEMFFREEDRHGCSVINLYELVQHAGNILPRLYLLCTVGSVYIKSK
EAPAKDILKDLVEMCRGVQHPTRGLFLRSYLAQITRDKLPDLGSEYEGEGDTVMDAVDFV
LQNFTEMNKLWVRMQHHGPVRLKEKLEKERSELRDLVGKNLHVLSQIEGVDLEMYKDVVL
PRVLEQVVNCKDEIAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPAVDVKTVLSRLM
DRLSNYADSSPEVLPDFLQVEAFAKLSSAIGKVIDAQIDMPVVGAISLYVSLLTFTLRVH
PDRLDYVDQVLGACVKKLSGKAKLEDSKATKQVVALLSAPLEKYTDIVTVLTLSNYPRVM
DHLDAETNKIMAKIIIESIMKNDTCVSTADKIHMLYNDEPEEMLKIICTVRKHIMAGGPK
RITFTVPPLVFSALKLVRRLQGQDGDMAGEEVPATPKKIFQLMNETIEALSSVPSSELAL
RLYLQCAEAANDCDLEPIAYEFFTQAFVLYEEEVADSKAQVTAIHLIIGTLQKMTVFGVE
NRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDGIKDGERVLLCLKRSLRIANA
AQQQANVTRGSSGPVTLFVEILNKYLYFFEKGNPQITPGAIQSLIELIKTEMQSDTTTPD
SASDAFFTSTLRYVQFQRQKGGLMGEKYNPIKV
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaaccgaaggaatcgaagacgaagagaaatggctagcggaaggcatcgccgct
attcaacacaacgcattttacatgtctcgtgctttggattcgaataatcttcgagaagca
ttgaagtattctgcattattattatctgagctccggacttcgaaactttcgccgcacaaa
tactatgagctctatatgcgagcttttgatgaattgaggaagctggagatgttcttcaga
gaagaagatagacatggttgttcagttattaacttatatgaactcgttcaacatgctgga
aatatattgcctcggttgtatctcctatgtacagtaggatctgtatacatcaaatcaaaa
gaggctcctgctaaagatattctcaaggatcttgttgaaatgtgtcgtggtgttcagcat
ccgacacgtggtctcttcttgaggagttatcttgctcaaattaccagagacaaattgcca
gacttaggttctgagtatgaaggagaaggcgataccgtcatggatgctgtagattttgtg
ctgcagaacttcacagagatgaataaactttgggttagaatgcagcatcatggacctgtc
aggttgaaagagaaactggaaaaagaaaggagcgaacttcgtgatcttgtcgggaagaat
ttgcacgttcttagtcagatagagggtgttgatcttgaaatgtacaaggatgtggttctg
cccagagttttggagcaggttgtcaattgtaaggatgagattgcccagtattatctgatg
gactgcataattcaggtctttccagatgagtaccacttgcagacacttgaaaccttattg
ggtgcttgtccgcaactccaacctgctgttgacgttaagactgtgctgtcacgattgatg
gacagattgtcaaactatgctgattcaagtcccgaagtgttacctgacttccttcaagtt
gaagcatttgccaagctaagcagtgccatcgggaaggtcattgatgcacaaattgatatg
ccagttgttggagccatttctttgtatgtatctctactgaccttcactctccgtgttcat
cctgatcgactagactacgtggatcaagtactgggagcatgtgtcaagaaactttctggt
aaagcaaagcttgaggatagtaaagcgacaaaacaagttgttgctctcctgagtgcaccg
ttggagaaatacactgacattgtgacagttctaactctttcaaattatccacgtgtcatg
gatcaccttgatgctgaaacaaataagatcatggcgaagataatcattgagagcatcatg
aagaatgacacctgtgtatcaactgctgacaagatacacatgctatataatgatgaacct
gaggaaatgttaaagataatatgcactgttaggaagcatataatggctggaggtccaaag
cgcataactttcacagttcctcctctagtcttttctgcactgaagttggttaggagactg
caaggtcaggatggagatatggctggagaagaggttccagctacaccaaagaaaattttt
cagttaatgaatgagactatcgaggctctttcatcagttccatcgtcagaactggcattg
aggttgtacttgcagtgtgcagaggctgccaatgattgtgatcttgaaccaattgcgtat
gaattttttacacaagcttttgtactatatgaagaagaagttgcggattcaaaagcgcaa
gtgactgcaatacacttgataattggaactcttcagaagatgactgtgtttggtgttgag
aacagggataccttaactcataaggccacagggtattcagcaaaacttctaaagaaacct
gatcaatgtagagcagtttatgcttgttcacatctcttttgggttgacgatcaagatggt
attaaagatggagaaagggtcttgctttgcctaaagcgttcgttgcggattgctaatgca
gcacagcaacaggcaaatgttacaaggggtagcagtggacctgtcacactttttgttgaa
atacttaacaagtacctctatttttttgagaaggggaaccctcaaataacacctggtgca
attcagagccttatagagttgattaaaactgagatgcagagtgacaccacgaccccagat
tctgcttcggacgctttcttcaccagcacattgcgctatgttcaatttcagagacaaaaa
ggagggctaatgggagagaaatacaatccaattaaggtgtga
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