Nicotiana tabacum (common tobacco): 107816999
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Entry
107816999 CDS
T04643
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107816999
Enzymes [BR:
nta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107816999
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Paralog
GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
107816999
NCBI-ProteinID:
XP_016498251
UniProt:
A0A1S4CAV4
LinkDB
All DBs
Position
Un
AA seq
386 aa
AA seq
DB search
MLFSTHYAGDILALRFRNGEPWKKVFGPVYIYLNSVSSDDEDILTLWTDAKEQMLIETEN
WPYDFPLSQDFVTADQRGTVSGRLLISDSYVSKRLITANSAFIGLAAPGDVGSWQTENKG
YQFWTQTDNEGYFLIKNIIPGNYSLYAWVPGFIGDYKFKNYINITPGSRTRLQTLVYNPP
RNGPTLWEIGIPERTAAEFFIPNPQPRLQNQLYIEHYAEKFRQYGLWDSYTQLYPNDDLI
YTVGSSNYQTDWFFAHVNRCTFNDEGNKTYIPTTWQIVFDLQEVEKSSNYTLQLALASIN
EAELQIRVNDQDADHVPHFTTGLIGKDNVIARHGIHGLYWLYSINVPGFLFATGKNVIFL
KQSRGSSPWSGLMYDYIRLEGPPAND
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttagtacacattatgctggagatattctagcactaagatttcgaaatggagag
ccctggaaaaaggtttttggccctgtttatatctacctaaattctgtctcatctgatgat
gaagatattctcacactatggacagatgcaaaggaacagatgttaatagaaaccgaaaat
tggccatacgatttccctctttcgcaagatttcgttacagctgatcagcgaggtactgta
agtggcagattactcattagcgacagctatgtaagtaaaagacttatcactgcaaattct
gctttcattgggttggctgcacctggagatgtagggtcatggcaaactgaaaataagggt
tatcaattttggactcaaacagataatgaaggatattttttgattaaaaatatcatccca
ggcaattatagcctgtatgcttgggttcctggatttattggtgattacaaattcaagaac
tacatcaacattaccccaggatcaagaactaggctgcaaactctagtgtataaccctcca
aggaatgggccaacattgtgggaaataggcattcctgaaagaactgctgcagaatttttc
attcctaatccacaaccaagactccaaaaccagttatacatcgaacattacgcagaaaag
tttaggcaatatggactatgggatagttacacacaactataccctaatgatgatttaatc
tacactgttggatcaagcaactatcaaacagattggttctttgctcatgtaaatagatgt
actttcaacgatgaagggaacaaaacatatataccaacaacatggcaaattgtgtttgat
cttcaagaagtggagaagtcttcaaattatacacttcagctagcattggcttcaataaat
gaagctgaattacaaattcgagtaaacgatcaagatgcagatcatgtacctcactttacg
acagggttgataggcaaagataacgtgattgcaagacatggaattcatggattgtattgg
ttgtatagtataaatgtccctggatttctttttgctactggaaaaaatgttatatttctt
aagcaaagtagaggttcaagcccctggagtggactcatgtatgattatattcgacttgaa
ggccctcctgcaaatgattaa
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