Nicotiana tabacum (common tobacco): 107817394
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Entry
107817394 CDS
T04643
Name
(RefSeq) uncharacterized protein LOC107817394
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107817394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nta03009
]
107817394
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107817394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Utp12
WDR55
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_ACSF4
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
EIF3I
WDR90_beta-prop_4th
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
WD40_Gbeta
PQQ_2
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_VPS8
Cytochrom_D1
PROPPIN
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
107817394
NCBI-ProteinID:
XP_075090296
LinkDB
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Position
17:36342220..36352128
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AA seq
604 aa
AA seq
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MGTTNIRDILTCLSPSLDFFAISSGDGRIKIWDTVKGQVQTEFADIVSTETTASLFTKSG
GHLSMDYTCMKWLSCDRKKKRKLGTSLLVLGTGSGDVLALDVSAGHLKWRFTDCHPGGVN
AISFPSHGSFIYTAGADGLVCKIDSMSGNLLHKFKASTKAISSLSVSSDGKMLATATSQL
KIFNCLDDKKLQKFSGHPGAVRRMVFSEDGRHVLSSAVGDRHVAVWKLDGSKKKSVCCLL
PMDHPAVFLDSYCIKSGVENDASLGVLAISEIGVCYFWHGKSFEELHNLKPTKICASLDE
EILKKHKEAVHSIFSAKLQSIGTSGSGHMFVAYGLLIKPSFEKVMVQPGADMRLKSSLDG
ILLPFSQSRKSKQASNTQSQVTALDCANAEGALLPLPKILDQVGVEHGIKPTVSKDVIGK
QGEDEVTICMEDQLRSIGIISSDYDLSPSSILDPKILKGISVDASMPPKKMKSAVLSLES
PDAYNLLNALVAAWQSRSSMGRHVLPWIYCILVNHNEFVTSQEPPTPLLDSLNKLTRSKV
AALSSLLQLSGRLQLVMAQIEKADNRKSPALTLEGRMDESEDDEVDEVMYGIDEESQTSS
DGDD
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgggcacaacaaatataagggacattttgacttgtttgagtccctctctggacttcttt
gctatcagttctggtgatggccgtatcaagatatgggatacagtgaagggtcaggtacaa
acggagtttgcagatattgtgtcaactgagacaacagcaagcttgtttactaagtcagga
ggtcatctttctatggattatacttgcatgaagtggttatcatgtgacagaaagaaaaaa
aggaagcttggaacttcattattggttttaggtacaggcagtggtgatgttttggctcta
gatgtatctgcaggtcatctcaaatggagatttactgattgccatcctggcggtgtcaat
gccatctcattcccttcacatggttcattcatttacacggctggtgctgatggactggtt
tgcaaaattgactccatgtcggggaacttactgcataagtttaaagcttccactaaagca
atatcatctttatccgtttcgtcagatgggaaaatgttagcaacagcaacttctcagttg
aaaattttcaattgcttggatgacaaaaagctccagaagttttcaggccaccctggggct
gttcggcgtatggttttctctgaagatgggagacatgttctttcttctgctgttggtgac
cgacacgtagcagtttggaagttagatggtagcaaaaagaaatcggtgtgctgcttgctt
ccaatggatcaccctgctgtctttttggatagttactgcattaaatctggagttgaaaat
gatgcaagtttaggtgttttggccatttcagaaattggtgtttgctacttttggcatgga
aagagttttgaggaattgcacaatttgaagcccacaaaaatatgcgcatctttagatgag
gaaattctgaagaaacataaagaagccgtgcatagtattttttcggcaaaattgcaatct
attggcacatctggttccggtcatatgtttgttgcatatggcttgttaataaaaccatca
tttgaaaaagttatggtgcagcctggggcggatatgagattaaaaagttcacttgacggg
atccttctacccttcagtcaatcccgcaaatctaaacaagcatctaacactcagagtcag
gttactgctctcgattgtgcaaatgcagagggtgccttacttcctttgcctaagattctt
gatcaggttggtgtcgagcatggaattaagcccacagtgagcaaagatgtcattggtaaa
caaggtgaagatgaggtgacaatttgcatggaggaccagttaagatccataggtataatt
agcagtgactatgatctctcgcctagctcaattcttgatcctaagattttgaaaggaata
agtgttgatgctagtatgccaccgaagaagatgaaatcagctgttttatctttggaatcg
cctgatgcttacaacttattgaatgccttggtggctgcatggcagtccagatcaagcatg
ggaagacatgttcttccatggatatactgtatattggtgaaccacaatgaatttgttaca
tcgcaggaaccaccgactcctcttctggattctttgaacaagcttaccaggtcaaaggtg
gcagccctgagctctttattgcagttatctggccgtttgcagctcgtaatggcacagatc
gagaaggctgataataggaaaagccccgcactaacactcgagggacggatggatgaaagt
gaggatgatgaggtagatgaagttatgtatggcatagatgaagaatctcaaacaagcagt
gacggagatgactag
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