Nicotiana tabacum (common tobacco): 107817432
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Entry
107817432 CDS
T04643
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107817432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107817432
03009 Ribosome biogenesis [BR:
nta03009
]
107817432
04131 Membrane trafficking [BR:
nta04131
]
107817432
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nta04147
]
107817432
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107817432
Ribosome biogenesis [BR:
nta03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
107817432
Membrane trafficking [BR:
nta04131
]
SNARE
SNARE associated proteins
Others
107817432
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107817432
Exosome [BR:
nta04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107817432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_14
AAA_22
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
nSTAND_NTPase5
Parvo_NS1
AAA_18
ATPase_2
ABC_tran
NB-ARC
Viral_helicase1
AAA_7
NACHT
Vps4_C
TsaE
AAA_lid_PRS2_C
IstB_IS21
DUF815
Zeta_toxin
AAA_24
Zot
Motif
Other DBs
NCBI-GeneID:
107817432
NCBI-ProteinID:
XP_075101005
LinkDB
All DBs
Position
22:62632598..62638549
Genome browser
AA seq
805 aa
AA seq
DB search
MSHQAESSDSKGAKKDFSTAILERKKSPNRLVVDEAVNDDNSVVALNPATMEKLQLFRGD
TILIKGKKRKDTVVIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGLTGDLFDAFLKPYFLEAYRPLRKGDNFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEEVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPLSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERKRSEN
PDSMDEDADDEIAEITPSHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAE
ASGGAAATDPFATSNAGADDDDLYS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaccaggccgagtcatctgactcaaaaggtgcgaagaaggatttctctacggcg
attttggagcgcaagaagtctccgaatcggctcgtcgttgacgaggcggtcaacgatgat
aactccgtcgtcgccctaaatcctgccaccatggagaagctccagctcttccgtggagat
acaattctcatcaagggaaagaaaaggaaggatacagttgtcattgcccttgctgacgaa
acgtgcgatgagccgaagattaggatgaacaaggttgtccgttcaaatttgagggttcgg
cttggagatgttgtgtctgtgcaccaatgtccagatgttaagtatggaaagcgtgtgcac
atacttcccatagatgatacaatagaaggtctcaccggggatttgtttgatgcattcttg
aaaccttactttttggaagcatatcgtcctttgaggaaaggggacaatttccttgttaga
ggagggatgagaagtgtggaatttaaagtcatcgagactgaccctggggagtattgtgtt
gttgctccagacacagaaatcttttgtgagggggagcctgttaaaagggaggatgaggag
agactggacgaagttggctatgatgatgttggtggtgtgagaaaacagatggctcagatt
cgtgaattggtggaattaccattgaggcatccacagctttttaaatccattggtgtgaaa
ccaccaaaggggattttactttatggaccccctggatctgggaagaccctgatagccaga
gctgtggctaatgaaacaggtgcatttttcttttgcattaatggaccagaaatcatgtcc
aaattggctggagagagtgaaagcaatctcaggaaggcgtttgaagaggctgagaaaaat
gctccatctattatattcattgatgaaattgattcaattgctcccaagcgagagaagaca
catggtgaagttgagagaaggattgtttcacaactcctgacactgatggatggattgaaa
tctcgtgctcatgtcatagttatgggagctaccaatcgtcctaacagcattgatcctgct
ctcagaaggtttggtaggtttgatagggaaattgacattggtgttcctgatgaaattgga
cgccttgaagttcttcgtattcataccaagaatatgaagcttgcagaagaagttgatttg
gaaagaatatcaaaagatacacatggttatgttggtgcagatcttgctgctctttgcacg
gaagctgcacttcagtgtattagagagaaaatggatgtcattgatcttgaagatgattcc
attgatgctgaaatattgaactcaatggctgtcacgaatgagcacttccaaactgctcta
ggaacaagcaatccatccgcattgcgtgaaacagttgttgaagtgcctaatgtctcatgg
gaagacattggaggccttgaaaatgtcaaaagagagcttcaagagactgttcaataccct
gtggagcatccagagaagttcgagaaatttggtatgtcaccttcaaaaggtgttcttttc
tatggtcctccaggatgtgggaaaactcttcttgccaaggcaattgcaaatgaatgtcaa
gccaatttcatcagtgtcaaaggacctgagctgctcaccatgtggtttggagagagcgag
gccaatgtccgtgaaatttttgacaaggccagacaatctgcaccctgtgtcctcttcttt
gatgagctcgactctattgctactcagaggggaagcagtgttggagatgctggtggagca
gctgatcgggttctgaaccaacttctgactgaaatggacggcatgaacgcaaagaagacc
gtttttataattggggccacaaacaggcctgatataattgaccctgcacttctgcgacct
ggtcgacttgaccagttaatttatatcccactcccagatgaagactcgcgccatcagatt
ttcaaggcgtgtcttagaaaatctccgctctcaaaagatgtcgatttgagagctcttgcc
aaatatactcagggattcagtggagctgatatcactgagatctgtcaacgggcctgcaaa
tatgccataagggagaacattgagaaagatatagaaaaggaaaggaaacgaagcgagaat
cctgattctatggatgaggatgctgatgatgagatagcagagattacgccctcgcatttt
gaggagtccatgaagtatgcacgacgaagtgtgagtgacgcagatatacgtaaataccag
gcatttgctcagaccttacagcaatctcgaggttttggaactgaatttcggtttgctgag
gcaagtggtggggctgctgcaactgacccctttgcaacttctaatgctggagctgatgat
gatgacttgtatagctaa
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integrated database retrieval system
