Nicotiana tabacum (common tobacco): 107817577
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Entry
107817577 CDS
T04643
Name
(RefSeq) uncharacterized protein LOC107817577 isoform X3
KO
K12586
exosome complex component RRP43
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107817577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107817577
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107817577
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
107817577
NCBI-ProteinID:
XP_016498910
UniProt:
A0A1S4CCS2
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Position
5:98962117..98968331
Genome browser
AA seq
303 aa
AA seq
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MAAVNGSSDLSSEMEVDAFRRLFPLRYHEYHLLKSVRPDARKLGSARDTTLALGAVASAD
GSALAKIGSTTMLAAIKMEVMTPTVECPDEGSIAIEFHMPPICSPLVRPGRPAEAAEVIS
KQLSDTIFSSGMIDLKELCLVGGKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLNIP
VVSLNDDGRIVLVSEDNVRGKLEKEPVNKEKRKLKLNSPPFSLTCILHKNYILADPTAEE
ESIMETVVTVVLDSYYQLVSLYKPGGPVLAHTSVIQDCVALARRRVKELQNVLNEAISDM
EVD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtcaatggctcaagtgacttgtcttcagagatggaggtggatgcatttaga
cgcctcttccctttgcgctatcatgagtatcatcttcttaaatctgtccgacctgatgcc
cgaaagcttggaagtgctagagatacaacacttgcacttggtgccgttgcctctgctgat
ggatcagcactagcaaagattggatccactacaatgctggctgccatcaaaatggaagtc
atgacaccgacagtggaatgtccagatgagggatccatagctatcgaatttcacatgcct
cccatttgttctcccctggttcggcctggtaggcctgcagaggcagcagaagtaatttcg
aagcagctgtcagacactatcttcagttctggcatgattgacttaaaagagttgtgcttg
gttggaggaaaagctgcatggatggcttacctggacatatactgtttggatgctgatggt
gccctgtttgatgctgcattactatctgcagttgctgccttttcgcatttgaacattcca
gttgtgtctttgaatgatgatgggcgaatagttcttgtgtctgaggacaatgtcagaggg
aaattggagaaggagcctgtcaataaagagaaaagaaaactgaaattgaactctccacca
ttctccttaacatgcatacttcacaagaactacatcttagcagatcctacagcagaggaa
gaatctataatggaaacagttgtaactgtggtattggattcatattaccagcttgtttca
ctttataagccaggtggaccagttcttgcccatacatcagttatccaggattgtgttgcg
ctggcaagacgtagagtgaaagagcttcagaatgtattgaatgaagctatttcggatatg
gaggtagactga
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