Nicotiana tabacum (common tobacco): 107817577
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Entry
107817577 CDS
T04643
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107817577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107817577
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107817577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
107817577
NCBI-ProteinID:
XP_016498910
UniProt:
A0A1S4CCS2
LinkDB
All DBs
Position
Un
AA seq
303 aa
AA seq
DB search
MAAVNGSSDLSSEMEVDAFRRLFPLRYHEYHLLKSVRPDARKLGSARDTTLALGAVASAD
GSALAKIGSTTMLAAIKMEVMTPTVECPDEGSIAIEFHMPPICSPLVRPGRPAEAAEVIS
KQLSDTIFSSGMIDLKELCLVGGKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLNIP
VVSLNDDGRIVLVSEDNVRGKLEKEPVNKEKRKLKLNSPPFSLTCILHKNYILADPTAEE
ESIMETVVTVVLDSYYQLVSLYKPGGPVLAHTSVIQDCVALARRRVKELQNVLNEAISDM
EVD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtcaatggctcaagtgacttgtcttcagagatggaggtggatgcatttaga
cgcctcttccctttgcgctatcatgaatatcatcttcttaaatctgtccgacctgatgcc
cgaaagcttggaagtgctagagatacaacacttgcacttggtgccgttgcctctgctgat
ggatcagcactagcaaagattggatccactacaatgctggctgccatcaaaatggaagtc
atgacaccgacagtggaatgtccagatgagggatccatagctatcgaatttcacatgcct
cccatttgttctcccctggttcggcctggtaggcctgcagaggcagcagaagtaatttcg
aagcagctgtcagacactatcttcagttctggcatgattgacttaaaagagttgtgcttg
gttggaggaaaagctgcatggatggcttacctggacatatactgtttggatgctgatggt
gccctgtttgatgctgcattactatctgcagttgctgccttttcgcatttgaacattcca
gtagtgtctttgaatgatgatgggcgaatagttcttgtgtctgaggacaatgtcagaggg
aaattggagaaggagcctgtcaataaagagaaaagaaaactgaaattgaactctccacca
ttctccttaacatgcatacttcacaagaactacatcttagcagatcctacagcagaggaa
gaatctataatggaaacagttgtaactgtggtattggattcatattaccagcttgtttca
ctttataagccaggtggaccagttcttgcccatacatcagttatccaggattgtgttgcg
ctggcaagacgtagagtgaaagagcttcagaatgtattgaatgaagctatttcggatatg
gaggtagactga
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integrated database retrieval system
