KEGG   Nicotiana tabacum (common tobacco): 107817613
Entry
107817613         CDS       T04643                                 
Name
(RefSeq) uncharacterized LOC107817613
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03022  Basal transcription factors
nta03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107817613
  09124 Replication and repair
   03420 Nucleotide excision repair
    107817613
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nta03021]
    107817613
   03400 DNA repair and recombination proteins [BR:nta03400]
    107817613
Transcription machinery [BR:nta03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     107817613
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     107817613
SSDB
Motif
Pfam: MAT1 DUF5962 DUF5721
Other DBs
NCBI-GeneID: 107817613
NCBI-ProteinID: XP_016498956
UniProt: A0A1S4CCX6
LinkDB
Position
Un
AA seq 188 aa
MVVASGTNNAFGKEMAIRKRIASIFNKREEDFPSLREYNDYLEEVEDMIFNLIEGIDVPA
IEAKIAQYQRENAEQIMIAQARKAEEYAAALAASKGQPTQPDGDAALGLGPQAGSSTGPQ
GHYAPAVAGGIAQPRPTQPLPVGSIPGLEYEDEETMKLKAEKAARAGGWSLEISRKRALE
EAFGSLWV
NT seq 567 nt   +upstreamnt  +downstreamnt
atggtggtggcatcaggaactaataatgccttcggcaaagaaatggccatcagaaaacgc
attgccagcatctttaataaaagagaagaggatttcccgtcattgcgcgagtacaatgat
tatctagaggaagtggaggatatgatattcaatttaattgaaggaatagatgttcctgct
attgaggcaaagattgcacagtaccagagagaaaatgcagagcaaatcatgattgctcaa
gcacgtaaggctgaagaatatgcagcagccttggcagccagcaagggacagcctacccag
cctgatggtgatgcagctttgggcctaggtcctcaggcagggtccagtactggtccacaa
gggcactatgcccctgcagttgccggaggtatagctcagccacggcccacgcagcctctt
ccagttggatcaattccagggttagagtatgaagatgaagaaacgatgaaactaaaagct
gagaaggctgctagagctggagggtggagtctagagataagcaggaaaagggcacttgaa
gaagcctttggaagcctatgggtctga

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