Nicotiana tabacum (common tobacco): 107817722
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Entry
107817722 CDS
T04643
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107817722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107817722
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nta04147
]
107817722
Membrane trafficking [BR:
nta04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
107817722
Exosome [BR:
nta04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107817722
Exosomal proteins of colorectal cancer cells
107817722
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
DUF4512
MKT1_C
HTH_10
Motif
Other DBs
NCBI-GeneID:
107817722
NCBI-ProteinID:
XP_016499076
UniProt:
A0A1S4CD93
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Position
7:141082092..141088153
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AA seq
433 aa
AA seq
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MAGNWLPAAQLTGSGRPVLEPGEVECSLLSSVDLLSEENPNFPHLKSGLLILTTHRLIWV
QESSTTSPPTAVFIPLSAVTHIFSLKKSIKSMFASPRFRFQASLKGMMVVITLILRGKSD
IDSFLEKFWEAWRRKAWEDGVVKSGPEVSGSGHGSGGDGGFAVRMPVVGVAGILRKEQEM
WENTDKSLQDAFQDLNALMGKAKEMVMLAERMRTKLLSGSTSQATGTNDEEIGTKEEMQE
LLLSVGIVSPVTKESAGALYHQQLSRQLADFVKIPLERSGGMINLIDIYCLFNRARGTEL
ISPDDLLRACSLWEKFDVPVMLRKFDSDVMVIQSKSHSDDEVFTRIRSLVTTPDTLRAGI
TASDAAMTLGIAPAMAKEHLLAAEAKGLLCRDVSPDGFRFFVNLLQEIDADDIFLVKEYG
IYHTWIKAISAAR
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcggggaattggctaccggcggcacagctaaccggaagtgggcggccggtgcttgaa
ccaggcgaggtagagtgcagccttctctcctccgtagacctcctttctgaagaaaaccca
aacttccctcaccttaaatcgggcctcctcattctcacaactcatcgtcttatttgggta
caagaatcatccaccacctcccctcctactgccgtattcatccctctttcagccgtcact
cacatcttctccctcaaaaaatccatcaagtcaatgtttgcaagccctagattccgattt
caggcttcacttaaagggatgatggtcgtaattactttgattcttaggggtaaatcggac
attgactcgttcttggagaagttttgggaagcatggagaaggaaagcttgggaagatggg
gtagtaaaatctgggccggaggtttcgggttcgggtcatgggtcaggtggtgatggagga
ttcgcggtgaggatgccggttgttggtgtagctgggatattgaggaaagagcaggagatg
tgggagaatactgataagagcttgcaggatgcttttcaggatttgaatgctctcatgggt
aaggctaaagaaatggtgatgctagctgagagaatgagaacgaagcttctctctggctca
actagtcaggccactggcacaaatgatgaggaaattggcaccaaagaagagatgcaagaa
ttactattaagtgttggtattgtgtctccagttactaaagaatctgctggtgctttgtat
catcaacaattatctcggcagttggcagattttgtcaaaattccactggagagatcggga
ggaatgattaatctcattgacatctattgccttttcaatcgggctcgtggaacagaattg
atatcacccgacgatttgctgcgtgcttgttctctctgggagaagtttgacgtaccagtt
atgcttcggaagtttgatagtgatgtcatggtcatccagagcaaaagccacagtgatgat
gaggtatttactagaataagatctttggttactacaccggacactttacgagcaggtatc
actgctagtgatgctgcaatgactctgggaattgctccagctatggccaaagagcacctt
cttgcagccgaggccaaaggacttctgtgtagagatgttagtccagatggattccgcttt
ttcgtcaatttgttgcaagaaattgatgctgatgatatattcttagtgaaagaatatgga
atctatcatacatggatcaaagctatctctgctgccaggtga
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