KEGG   Nicotiana tabacum (common tobacco): 107817888
Entry
107817888         CDS       T04643                                 
Name
(RefSeq) THO complex subunit 4C-like
  KO
K12881  THO complex subunit 4
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03013  Nucleocytoplasmic transport
nta03015  mRNA surveillance pathway
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107817888
  09122 Translation
   03013 Nucleocytoplasmic transport
    107817888
   03015 mRNA surveillance pathway
    107817888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107817888
   03041 Spliceosome [BR:nta03041]
    107817888
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107817888
    TREX complex
     107817888
Spliceosome [BR:nta03041]
 Complex C
  Other components
   EJC/TREX
    107817888
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107817888
SSDB
Motif
Pfam: FoP_duplication C2H2_ASCIZ
Other DBs
NCBI-GeneID: 107817888
NCBI-ProteinID: XP_016499266
UniProt: A0A1S4CDS9
LinkDB
Position
Un
AA seq 139 aa
MDIVASGFDKVGLLKMADKCLLLFYEKCAAEVVFARRSDAFQAHKMYNNVQLDGKPIKIE
IAGFNPLSARVNVVGGAKWRRTVVMAQRGRGGFRNAAVRGCGRGPGRVGRGNNKGAEKSA
EELDKELDSYHVSAEAMPT
NT seq 420 nt   +upstreamnt  +downstreamnt
atggacatagttgcaagcggttttgacaaagttgggctgttaaaaatggctgataagtgc
ctgctattgttttacgagaaatgcgctgctgaggtggtctttgccagaagaagtgatgca
ttccaagcacataaaatgtataacaatgtgcagttagatgggaagcctattaagattgaa
atagctggtttcaaccctttgtcagctcgtgtaaatgtagttggcggagcgaagtggagg
aggactgttgtcatggctcaaaggggccgtggtggtttcagaaatgcagctgtgcgtggt
tgtggtcgaggtccaggtcgcgttggtaggggaaataacaagggtgctgagaagtcagct
gaggaacttgacaaggagctggatagctaccatgtcagcgctgaagccatgccgacttag

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