KEGG   Nicotiana tabacum (common tobacco): 107817895
Entry
107817895         CDS       T04643                                 
Name
(RefSeq) DNA repair protein RAD4-like
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    107817895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nta03400]
    107817895
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      107817895
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_1 BHD_2 Transglut_core IML1
Other DBs
NCBI-GeneID: 107817895
NCBI-ProteinID: XP_016499273
UniProt: A0A1S4CDQ2
LinkDB
Position
Un
AA seq 932 aa
MRTRNQAKLHNQSTVNEESVKHYSEMESRSGCKDRASDNETLANISRGAVGKLLKRVNKS
RGSRGLNTDDSYLCKQDSTGKPENRSRETEKQLTGTTVARTTLDAECCTKDVLQNVPLEV
ENEGTDVQYQSIEREDELDGIDWEDGSVHTLKPESNVKEDTSNGVTVEFDALPDSSKQKT
VRRATAEEKELAEVVHKVNLLCLLARGRLVDSACNDPLIQASLLSLLPAHLLKLTDVPKL
TTKALTPLVSWFHSHFRVRGASDSEKSFHSALASTLESQEGTPEEVAALSVALFRALNLT
TRFVSILDVASLKPEIEKPYPSGQSPSKAGSGIFNSSTLMVAAPKYSPLSPAKSLADGKH
YNDKSRATITDKSNKRMSPSTSDALRDANDACIMKREQPKRKGDLEFEMQLEMALSSTAV
EIVRNTMVSEVADVQSTSSNVSPFKKKKIKAEECSTSSHGLSTAVGSRKVGAPLYWAEVY
CSGENLTGKWVHVDVVNAITDGELNVEAAAAACKSHLRYVVAFAGNGAKDVTRRYCTKWY
KIASERVNSIWWDAVLAPLKELESVATSDVVHLRQETSDESKKTEVAQSTATRSSLEDME
LETRALTEPLPTNQQAYRNHHLYIIERWLNKYQILYPKGPVLGFCSGHPVYPRSCVQTLK
RKEKWLREGLQVKANEIPAKVLKHSGKQKKEQDVKDDDYGEEDCGGTVALYGQWQTEPLF
LPPAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRLVPVAKRLEIDFAPAMVGFEFRNG
RSLPVYEGIVVCIEFKDAILETYAEEEERRQANERKRSEAEALSRWYQLLASLITRQRLH
NCYADGASSQSAINFATSNDKSSLLARGTEDTKTTPEYQQEKSEIAQSISPSTVLAEDHE
HVFLVEDQTVDEESSTRTKRCRCGFSVQYEEL
NT seq 2799 nt   +upstreamnt  +downstreamnt
atgcgaaccagaaatcaggctaagctacataatcaatcaactgtaaatgaagaatctgtg
aaacactacagtgagatggagagccgaagcggctgcaaagatagagccagtgataacgaa
actcttgcaaacatatctcgaggtgcagtgggaaaactcttgaaacgagtcaacaagtca
cgtggctctcggggtctgaacacagatgatagttacctatgcaaacaagattctacgggc
aagccagagaacagatcaagggagacagaaaagcagcttaccggcactacagtggcaagg
actacattagatgctgaatgttgcactaaagatgtgttacaaaatgtgccattggaagtg
gaaaatgaaggtacagatgttcagtatcagagtatcgagagggaagatgaacttgatggt
attgattgggaagacgggtcagttcatactttgaagcccgaaagcaatgttaaggaagat
acaagcaatggtgtgactgttgagtttgatgctctgcctgactctagtaaacagaaaaca
gtacgccgagcaactgcagaagaaaaggaattggctgaggttgtgcataaggttaacttg
ctttgtttactagcgaggggcaggttggtagatagtgcttgcaatgatcctcttatccag
gcttctttactttcactgctgccagcacatctgctgaagctaacagatgttccaaaactt
accacgaaggcgctaactcctcttgtcagttggttccacagtcatttccgtgttagaggt
gcaagtgattcagagaagtcatttcattcagctttggcatcaactcttgagtctcaggaa
gggaccccagaagaagttgctgcattgtctgtagcactgtttagggctttgaatcttacg
accaggttcgtatcaatcttggatgtggcttccttgaagccggaaattgagaaaccatat
ccctctggtcaatcccctagtaaggctggtagcgggatatttaactcttcgacattgatg
gtggctgcaccaaagtattctcctctctctcctgctaaatctttggctgatggcaagcat
tacaatgacaagtctagagcaactattacagataagtctaataaaagaatgtcgccatca
acatcagatgctctacgtgatgctaacgacgcatgtattatgaagagagagcagccaaag
agaaaaggggatcttgaatttgagatgcagttggaaatggctctttcttccaccgcagtt
gaaatagttaggaacactatggtctcagaagtggcggatgtacaaagtacttcgtcaaat
gtatcaccgttcaaaaagaagaaaattaaagcagaagagtgttcgacttcctctcatgga
ctatcaactgctgttggatctaggaaagtaggggcgcctctatactgggcagaggtctac
tgcagtggtgagaatctgacggggaaatgggtgcatgttgatgttgtaaatgcaattact
gatggagagctaaatgtggaagctgcagctgctgcatgcaagtcacatttacgatatgtt
gttgcttttgctggaaatggagctaaagatgttacacgcaggtactgtacaaagtggtac
aagatagcatctgaacgagtcaactcaatttggtgggatgcagtattggcaccattaaag
gagttggagtccgtggcgaccagtgatgttgttcatttgagacaggaaacttctgatgaa
agcaagaaaacagaagtagcacaatcaacagcaaccaggagctctctagaagatatggag
ttggaaactagggcactgactgaacctcttccaacaaatcaacaggcttacagaaaccat
cacttatacataattgaaagatggcttaacaagtatcagattctttaccccaaaggacct
gtattaggtttttgttctggtcatccagtatacccacgatcctgtgtacaaacactcaaa
agaaaggaaaaatggcttcgtgaggggctccaagtgaaagctaacgagatccctgcaaag
gttctgaagcattctggaaagcagaaaaaagaacaggatgttaaggatgatgattatggc
gaggaggattgtggaggaactgtcgccctctatggacagtggcaaactgaaccactgttt
cttcctcctgcagtaaatggcattgtacctaagaatgagcgtggtcaagtggatgtctgg
tccgagaagtgccttccaccgggcacagtccacttgagattgccaaggttggttcccgtt
gctaaaaggctagaaattgattttgcacctgctatggttggatttgaattccggaatggt
cgatctcttcctgtatatgaggggattgtggtgtgtatcgagtttaaggatgcaattctc
gagacatatgcagaagaagaggagagaagacaggccaacgagaggaagaggtctgaagca
gaagctctttctaggtggtatcagcttcttgcatcacttattacccgacagaggctacac
aattgctacgcggacggggcatcctcacaatcagctatcaattttgcaacatccaatgat
aaatcctccctactagctcgtggcactgaggatacaaaaacgactcccgaataccagcaa
gaaaaatctgagattgcccaatccattagtccatcaactgtacttgcagaagaccacgag
catgtattcctagtagaagatcagactgttgatgaagaaagttcaacaaggacaaaacgt
tgtcgttgtgggttttcagttcaatatgaggagttgtag

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