Nicotiana tabacum (common tobacco): 107817895
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Entry
107817895 CDS
T04643
Name
(RefSeq) DNA repair protein RAD4-like
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
107817895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nta03400
]
107817895
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
107817895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
IML1
Motif
Other DBs
NCBI-GeneID:
107817895
NCBI-ProteinID:
XP_016499273
UniProt:
A0A1S4CDQ2
LinkDB
All DBs
Position
Un
AA seq
932 aa
AA seq
DB search
MRTRNQAKLHNQSTVNEESVKHYSEMESRSGCKDRASDNETLANISRGAVGKLLKRVNKS
RGSRGLNTDDSYLCKQDSTGKPENRSRETEKQLTGTTVARTTLDAECCTKDVLQNVPLEV
ENEGTDVQYQSIEREDELDGIDWEDGSVHTLKPESNVKEDTSNGVTVEFDALPDSSKQKT
VRRATAEEKELAEVVHKVNLLCLLARGRLVDSACNDPLIQASLLSLLPAHLLKLTDVPKL
TTKALTPLVSWFHSHFRVRGASDSEKSFHSALASTLESQEGTPEEVAALSVALFRALNLT
TRFVSILDVASLKPEIEKPYPSGQSPSKAGSGIFNSSTLMVAAPKYSPLSPAKSLADGKH
YNDKSRATITDKSNKRMSPSTSDALRDANDACIMKREQPKRKGDLEFEMQLEMALSSTAV
EIVRNTMVSEVADVQSTSSNVSPFKKKKIKAEECSTSSHGLSTAVGSRKVGAPLYWAEVY
CSGENLTGKWVHVDVVNAITDGELNVEAAAAACKSHLRYVVAFAGNGAKDVTRRYCTKWY
KIASERVNSIWWDAVLAPLKELESVATSDVVHLRQETSDESKKTEVAQSTATRSSLEDME
LETRALTEPLPTNQQAYRNHHLYIIERWLNKYQILYPKGPVLGFCSGHPVYPRSCVQTLK
RKEKWLREGLQVKANEIPAKVLKHSGKQKKEQDVKDDDYGEEDCGGTVALYGQWQTEPLF
LPPAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRLVPVAKRLEIDFAPAMVGFEFRNG
RSLPVYEGIVVCIEFKDAILETYAEEEERRQANERKRSEAEALSRWYQLLASLITRQRLH
NCYADGASSQSAINFATSNDKSSLLARGTEDTKTTPEYQQEKSEIAQSISPSTVLAEDHE
HVFLVEDQTVDEESSTRTKRCRCGFSVQYEEL
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccagaaatcaggctaagctacataatcaatcaactgtaaatgaagaatctgtg
aaacactacagtgagatggagagccgaagcggctgcaaagatagagccagtgataacgaa
actcttgcaaacatatctcgaggtgcagtgggaaaactcttgaaacgagtcaacaagtca
cgtggctctcggggtctgaacacagatgatagttacctatgcaaacaagattctacgggc
aagccagagaacagatcaagggagacagaaaagcagcttaccggcactacagtggcaagg
actacattagatgctgaatgttgcactaaagatgtgttacaaaatgtgccattggaagtg
gaaaatgaaggtacagatgttcagtatcagagtatcgagagggaagatgaacttgatggt
attgattgggaagacgggtcagttcatactttgaagcccgaaagcaatgttaaggaagat
acaagcaatggtgtgactgttgagtttgatgctctgcctgactctagtaaacagaaaaca
gtacgccgagcaactgcagaagaaaaggaattggctgaggttgtgcataaggttaacttg
ctttgtttactagcgaggggcaggttggtagatagtgcttgcaatgatcctcttatccag
gcttctttactttcactgctgccagcacatctgctgaagctaacagatgttccaaaactt
accacgaaggcgctaactcctcttgtcagttggttccacagtcatttccgtgttagaggt
gcaagtgattcagagaagtcatttcattcagctttggcatcaactcttgagtctcaggaa
gggaccccagaagaagttgctgcattgtctgtagcactgtttagggctttgaatcttacg
accaggttcgtatcaatcttggatgtggcttccttgaagccggaaattgagaaaccatat
ccctctggtcaatcccctagtaaggctggtagcgggatatttaactcttcgacattgatg
gtggctgcaccaaagtattctcctctctctcctgctaaatctttggctgatggcaagcat
tacaatgacaagtctagagcaactattacagataagtctaataaaagaatgtcgccatca
acatcagatgctctacgtgatgctaacgacgcatgtattatgaagagagagcagccaaag
agaaaaggggatcttgaatttgagatgcagttggaaatggctctttcttccaccgcagtt
gaaatagttaggaacactatggtctcagaagtggcggatgtacaaagtacttcgtcaaat
gtatcaccgttcaaaaagaagaaaattaaagcagaagagtgttcgacttcctctcatgga
ctatcaactgctgttggatctaggaaagtaggggcgcctctatactgggcagaggtctac
tgcagtggtgagaatctgacggggaaatgggtgcatgttgatgttgtaaatgcaattact
gatggagagctaaatgtggaagctgcagctgctgcatgcaagtcacatttacgatatgtt
gttgcttttgctggaaatggagctaaagatgttacacgcaggtactgtacaaagtggtac
aagatagcatctgaacgagtcaactcaatttggtgggatgcagtattggcaccattaaag
gagttggagtccgtggcgaccagtgatgttgttcatttgagacaggaaacttctgatgaa
agcaagaaaacagaagtagcacaatcaacagcaaccaggagctctctagaagatatggag
ttggaaactagggcactgactgaacctcttccaacaaatcaacaggcttacagaaaccat
cacttatacataattgaaagatggcttaacaagtatcagattctttaccccaaaggacct
gtattaggtttttgttctggtcatccagtatacccacgatcctgtgtacaaacactcaaa
agaaaggaaaaatggcttcgtgaggggctccaagtgaaagctaacgagatccctgcaaag
gttctgaagcattctggaaagcagaaaaaagaacaggatgttaaggatgatgattatggc
gaggaggattgtggaggaactgtcgccctctatggacagtggcaaactgaaccactgttt
cttcctcctgcagtaaatggcattgtacctaagaatgagcgtggtcaagtggatgtctgg
tccgagaagtgccttccaccgggcacagtccacttgagattgccaaggttggttcccgtt
gctaaaaggctagaaattgattttgcacctgctatggttggatttgaattccggaatggt
cgatctcttcctgtatatgaggggattgtggtgtgtatcgagtttaaggatgcaattctc
gagacatatgcagaagaagaggagagaagacaggccaacgagaggaagaggtctgaagca
gaagctctttctaggtggtatcagcttcttgcatcacttattacccgacagaggctacac
aattgctacgcggacggggcatcctcacaatcagctatcaattttgcaacatccaatgat
aaatcctccctactagctcgtggcactgaggatacaaaaacgactcccgaataccagcaa
gaaaaatctgagattgcccaatccattagtccatcaactgtacttgcagaagaccacgag
catgtattcctagtagaagatcagactgttgatgaagaaagttcaacaaggacaaaacgt
tgtcgttgtgggttttcagttcaatatgaggagttgtag
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