Nicotiana tabacum (common tobacco): 107818392
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Entry
107818392 CDS
T04643
Symbol
ATG13c
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107818392 (ATG13c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107818392 (ATG13c)
03029 Mitochondrial biogenesis [BR:
nta03029
]
107818392 (ATG13c)
Membrane trafficking [BR:
nta04131
]
Autophagy
Autophagosome formation proteins
ULK complex
107818392 (ATG13c)
Atg1 complex
107818392 (ATG13c)
Mitochondrial biogenesis [BR:
nta03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107818392 (ATG13c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
107818392
NCBI-ProteinID:
NP_001312951
UniProt:
A0A0K0XR02
LinkDB
All DBs
Position
Un
AA seq
608 aa
AA seq
DB search
MDFQNNPQGEYGRFEQILAQFLLKTLHIVLDCRVPSIRPYGRSGEVKKSDKWFNLVLGDR
PAVLESLNFWHRNLMEPMIIDIILVQEKPSSLSEHSSGTAFAGAYTETIIERWVVQYEYL
RTMVPQVGESSYKKTYKKSIILLRSLYSMMRLLPAFKAFRKLSSTQSCDFDIIYKVSSFS
APFSRVEEELMKHYTFTPVDAQQGRFSISVSYRENLSDFNLEIAASFPPEIITDYVGSPL
TDPMRSFPSSSSDKDVRPTSFPSRGAQSSSSSPFQRPHSWTSGFLMSPSLPRTQPYVGSP
PLYRTPHELSSSPGDVYGQRVSPNNRLPIHHKATSFDEYQLSPPFSSSPSPSPPTYMSGA
NPGQTRMRSGTGPVSIPHPMMGTSSRYLSPNLSDPNRHSLPPMSPRSTKQDSSSNDSPSG
IRSFRKMDPLRTLESNISTMSPGQKISRDARDDSGRFSGLLSSSGSPRIFSRSSSRLSFQ
DDLDVFDFSCPFIVDDVDTSDSQVSENLDGRKGSEVSSQASATTRKSQDAAVGALVHMLR
TAPPLRQDSSCYTSHSVKTEQEGELGTASGFFINRKASDALEELKTYKDLKDLLLSKSAT
RSVSEGGT
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagaataatccacagggtgaatatggaaggtttgaacagatacttgctcaa
tttcttcttaaaaccttgcatattgttttggactgtagagttccttcgatccgaccttat
ggtcgtagtggagaggtgaaaaagagtgacaagtggttcaatttggtgttgggagatcgc
cctgctgttcttgaaagtttaaatttttggcacagaaatttgatggaaccaatgataata
gacataatacttgttcaagagaaacctagttctttgtcagagcatagttcaggtacagca
ttcgcaggggcgtatacagaaaccatcatagagaggtgggttgtacaatatgagtatttg
aggacaatggttcctcaagttggtgaatcttcttacaagaaaacatacaagaaatcaatt
atactgctccgctccctttattcaatgatgaggctccttcctgcattcaaggccttcagg
aaactttcatcaactcagagttgtgactttgatatcatttacaaggtctcttcatttagt
gctccattctccagggtagaggaggagttgatgaagcattatacttttactccagttgat
gcccagcagggccgtttttctatatctgtgtcatatcgtgaaaatctgtccgactttaac
ctggagattgcagcatcctttccgcctgagatcatcacagattatgtaggcagtcctctt
actgacccaatgaggtcatttccttcttcctcatctgataaggatgtccgccctacatca
tttccgtcgagaggggcacagtcatcttcttcatcacctttccagcggccgcacagttgg
acaagtggtttcctcatgtcaccttctttacctcggacccagccatatgtaggatctcca
cctttgtaccgcacaccacatgagctttcatcttcgcctggtgatgtatatgggcagagg
gtttcaccgaacaacagattgcctatacaccacaaagcgacgagctttgatgagtaccag
ctttcacctccattttcatcatctccatccccatctccacccacatatatgtcaggagca
aatcctgggcagactcgaatgcgttcaggaactggccctgtcagtatccctcatccaatg
atgggtacaagttccagatacctatctcctaatttgtctgatcctaacaggcattctctc
cctccaatgtctcccagaagcacaaagcaggattcatcatccaatgattccccttctgga
atcaggtcattccggaaaatggatccactaaggactctagagtctaatatcagcactatg
agtcctggacaaaagatttctagagatgctagagatgattcagggcggttctcgggtttg
ctatcttcaagtggttcgccacgtatattttctagaagttctagcagactgtcttttcaa
gatgacttggatgtctttgatttttcctgtccttttattgttgatgatgtcgatacttcc
gattcgcaagtcagtgagaaccttgatgggagaaaaggttcggaagtctcttctcaagca
tctgcaacaaccagaaaatctcaagatgccgctgtaggtgcccttgttcacatgctgaga
actgctcctcctctgcgccaagattctagctgttatacctcacatagcgtaaagactgaa
caggagggagaacttggaactgcatctggattttttatcaatagaaaggcatcagatgct
cttgaggagctcaaaacttacaaagatttgaaagatctactactgtccaagagtgcaacc
cgttcagtcagtgagggtggaacttaa
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