Nicotiana tabacum (common tobacco): 107818409
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Entry
107818409 CDS
T04643
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03013
Nucleocytoplasmic transport
nta03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107818409
03015 mRNA surveillance pathway
107818409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107818409
03041 Spliceosome [BR:
nta03041
]
107818409
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107818409
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
107818409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
107818409
NCBI-ProteinID:
XP_016499900
UniProt:
A0A1S4CFF1
LinkDB
All DBs
Position
Un
AA seq
873 aa
AA seq
DB search
MSGGFFRGTSAEQDTRFSNKQAKLLKSQKFAPELEHLVDMTKVKMDVMKPWIAKRVTELI
GFEDEVLINFIYGLLERKVVNGKEVQISLTGFMERNTGKFMKELWALLLSAQNNASGVPQ
QFLEAKEEEMRKKKVETDRIANEIHKKKERESRELDQEKRKMMDDYASNSRQKNAALEPS
PKHQPRVRSTDDLDHVDRNGSRRIHRVSRSPRSADHSPSPRRSRSISKSFSNSRSYSGER
RRSRSTSGSPLERRGRSLSSERVYRSPPRLSVSPRRKHSPQQSLSPPRHRQRSTSRVRQG
SPFVARYRRRSPFRRRRSPIRCRSRSPIQRRSRSPIRRRSRSPMWRRSRSPSRRSPGRYR
SRSPIRRRSPLLRRTPNSTKRRSPSPVGRGYHRSPLSPRSSLSPAQRKSFISGRKRSLTP
ARRSISPQESLSPSPIYRKSPSPIRKRILKNESSPVQSPRGRIRSRVKYSPIRHAPPVKT
EAHKGSRSLERSRPISSRSPQRDVYDRKDSRKKESLLPPRRRRSPSVSESPRSRSASESP
PTKRERSPSENRGPKSTLNQRERKTIDTDSPNPGKLREHRVSSNISAKIADEKEMNHSRE
AFEHKPRSSRKIATTPDPNKDLEKGRDEEEFSEFHSHSDRMESRKRNEVMKSEKFSAMME
QTKELDQQKSPSSHRHSHSVKRERESYAGESFKAEKEYLSHANYIKGKELLESETPLTSS
RKVEQNDQSGDEGSASEESEKRRAKVKEKRKHKRSGKYESSSDDSYDSDVEDRKEAKRRR
KEERRWKKEEKRRRREERQRRKEERHAQKLKSKSANAMSSPSDTERNPDCHASYDEHLRK
GDVEESESMQKRLEIELREKALESLRAKKGISH
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgggtttttccggggtacgtcggccgagcaggacactcggttctctaataag
caagctaagctgttgaaatctcagaagttcgctcctgaattggaacatctggtggacatg
accaaagtaaagatggatgtaatgaaaccatggattgccaaacgagttaccgagcttatt
ggttttgaagatgaagttcttatcaatttcatttatggccttcttgaacgaaaggtagtt
aacggcaaggaggttcaaatttcacttactggattcatggaaagaaacactggcaaattt
atgaaagagctttgggcgctactacttagtgcacagaacaatgcaagcggtgttcctcag
cagttcctagaagccaaagaagaggaaatgagaaagaagaaggttgagacggatcgaatt
gccaacgagattcataagaaaaaggagagagagagtagggagctggatcaagagaaaagg
aagatgatggacgattatgccagcaattcgagacaaaaaaatgctgcactggagccaagt
ccgaaacaccagcctcgggtgcgctcgacagatgatttagaccatgttgacagaaatggc
tcaagaagaatacacagggtctctagatccccacgttcagcagatcattcaccctccccg
aggagatcaaggtcaatcagcaagtcattttctaattcaaggagttattctggtgaaagg
cgcaggtcacgaagtacatccggatctcctttagaacggaggggtcgctcactttcatct
gaaagggtataccgctctccaccaaggctctctgtttcacctcgtaggaagcattcacct
caacaatctctctctccaccaagacacaggcaaagatcaacctcccgagtacgtcaaggg
tcaccttttgttgcacggtatcgaagacgttctccattccgacgtaggaggtctcccatt
cgatgtagatcgaggtctcccattcaacgtagatcgaggtctccgattaggcgtagatca
cgatcccctatgtggcgtaggtcacggtctccaagtagacgctcaccagggcgatataga
tcaaggtcacctattagacgtcgatcaccacttctgcgcagaacaccgaattcaacaaaa
cgtaggtccccttctccggtgggtcggggttaccaccgatctccattgagtcctcgaagt
tctctatctccagcacaacgaaaatccttcatatctggcaggaaaagatccttaacccct
gccagaaggtctatttcacctcaagaatcactttctccctcacccatttaccgcaagtct
ccttcaccaatcagaaagagaatattgaagaatgaaagttcaccagttcaatctcctcgg
ggaaggataaggagccgtgtaaaatactcccctattcgacatgctcctccagtaaaaact
gaggcgcataaaggatccagatcattggaacgtagtcgtcctatttcttctaggtcacca
cagagggacgtatatgaccgtaaggattcacgaaaaaaagagtcgcttttgcctcctcgg
cgacggcggtcaccatctgtttcagaatctccacgctccagatcagcctcagaatctcca
ccaacaaaaagggaaaggagtcctagtgaaaatagagggccaaagagtactttgaaccag
agggagagaaagacaattgacactgacagcccaaatcccgggaaattgagagagcacaga
gttagttctaacatttctgcgaaaattgcagatgagaaagaaatgaaccattcaagggag
gcctttgagcataaacctaggtcttcaagaaaaattgctacaacacctgatccaaataaa
gatcttgaaaaggggcgggatgaggaagaattttctgaatttcatagccattcagatcgc
atggagtcaagaaagcgaaatgaagtgatgaagagtgaaaaattttctgcaatgatggag
caaacaaaggaactggatcaacaaaagtcaccatcaagccatagacactctcattcagtt
aagagggaaagggaatcatatgctggggagagcttcaaagcagagaaggaatacctgtct
catgcaaactatatcaagggcaaagagctacttgagtcagaaactcccctcacttcatca
aggaaagttgagcagaatgatcaaagtggtgatgagggttctgcttctgaggaaagtgaa
aagcgtagagctaaagttaaggaaaaaagaaagcataagaggtctggcaaatatgagtca
tcgtcagatgatagttatgactctgatgttgaggataggaaggaggctaaaaggaggagg
aaagaggagaggagatggaagaaagaggagaagcgtaggcgtcgggaggagagacagcgc
agaaaggaagaaagacatgcccagaaactaaaatcgaagtcagctaatgccatgtcttcg
ccatcagatacggagagaaatcctgattgccatgcttcttatgatgagcatctgaggaag
ggggatgtcgaggagtcagagtccatgcagaaaaggcttgagattgagctgcgggagaag
gctcttgaatctctcagagcaaaaaagggcatcagccattaa
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