Nicotiana tabacum (common tobacco): 107818481
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Entry
107818481 CDS
T04643
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03020
RNA polymerase
nta03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107818481
09124 Replication and repair
03420 Nucleotide excision repair
107818481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nta03021
]
107818481
03400 DNA repair and recombination proteins [BR:
nta03400
]
107818481
Enzymes [BR:
nta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107818481
Transcription machinery [BR:
nta03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107818481
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107818481
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
107818481
NCBI-ProteinID:
XP_016499992
UniProt:
A0A1S4CFN5
LinkDB
All DBs
Position
Un
AA seq
1193 aa
AA seq
DB search
MDTEEEYEQQYNNDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
SADIEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLT
YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG
ECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPST
MFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQ
MMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEY
CETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR
AYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAS
TLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSA
AYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVN
TEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKXVTYIFSFFFQESPEEGGWHD
LVAKGYIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASII
PFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQ
LPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGR
PDRASTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHS
TSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
LHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS
FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAKDQKKKGA
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggatacggaagaagaatatgagcaacaatacaataatgatgatgatgaagaggaaata
acccaagaggatgcttgggctgtcatcagtgcttactttgaagaaaaggggcttgtccga
cagcaactggattcatttgatgagtttattcagaacactatgcaagaaattgtggatgaa
tctgctgatattgagatccgacccgaatcccagcataaccccggtcaccaatctgacttt
gctgagacaatatacaaaatcaactttggtcagatttatttgagtaagccaatgatgaca
gagtcagatggcgaaactgctaccttgtttccaaaggctgcaaggttgaggaatctgaca
tactctgcaccactgtatgtggatgttacaaagagagtcatcaagaaagggcatgatggt
gaagaagttactgaaactcaggacttcacaaaagtcttcattggaaaggttcctataatg
cttcggtcaagttactgcacattatatcaaaattcagagaaagatctaacagagcttgga
gaatgtccattagatcaaggtgggtacttcattatcaatggaagtgaaaaggtcctaatt
gctcaggagaagatgagcaccaatcatgtgtatgtatttaagaagaggcaacccaacaag
tatgcgttcgttgcggaagtcaggtcaatggcagaatctcaaaaccgcccgccgagtact
atgtttgtgcggatgctctcaagaactagcgcgaaagggggttcctcgggccaatacatt
cgggcgacacttccatatatccggacagagattcctatcattatcgtgtttcgagctcta
ggttttgtggctgataaggatatattggaacatatttgttatgatttcaatgatactcaa
atgatggagttgttgcgtccgtctttggaagaagcttttgttatacaaaaccaacaggtt
gctcttgactacatcgggaagagaggggctacagttggtgttacaagggaaaagaggata
aagtatgccaaagagattcttcagaaagaaatgcttcctcatgttgggattggagagtat
tgtgaaacaaagaaagcttattattttgggtatatcatccaccggcttctgttgtgtgca
cttggccgaagggctgaggatgatagggatcactatggaaataagagactggatcttgct
ggtcctttgcttggtggcctgtttcgaatgctttttagaaagttgacaagggatgttaga
gcctatgttcagaagtgtgttgacaatggaaaagatgtaaacctacaatttgcaatcaaa
gctaaaaccattaccagtgggctgaaatactctcttgctactggaaactgggggcaagct
aatgcagcgggtacaagagctggtgtttcacaggtgttgaatcgtctgacttatgcttct
actttgtctcacttgcgaaggttgaactcccctataggacgagaagggaaactggccaaa
ccaaggcaattgcataattcacaatggggaatgatgtgtcctgcagaaacaccagaaggt
caagcatgtgggctggtgaagaatctagccttaatggtttatataacagttggttcagcg
gcatatccaattctggagtttttggaagagtggggtactgagaactttgaggaaatttct
cctgccgttattccacaggctacaaagatctttgtcaatggtacctgggtgggaattcat
cgcgatcctgacatgttggtgagaacactcagacgacttaggagaagggttgatgtcaat
actgaggtcggggtagttcgtgatatccgtttgaaagaacttcgaatttataccgactat
gggaggtgcagtcgtccattatttattgtggaaaagcaaaggctgctgatcaagaagana
gttacttacatattcagtttcttttttcaggaatcacctgaagagggtggctggcatgat
ctggtggctaagggatacatcgagtacattgacactgaagaagaagaaacaacgatgatt
agcatgactataaatgatcttgtgcaagcacgccttaatcctgaggaagcttattctgat
acctatacccattgtgagattcacccgtcactaatattgggtgtttgtgcatcaattatt
ccgtttcctgatcataatcagtctccccgtaatacttatcagtcagctatgggtaagcaa
gccatggggatttatgttaccaactaccaatttcggatggacacattggcctatgtgctt
tattatcctcagaagcctcttgtcacaacacgggccatggaacacttgcatttcaggcaa
ctgcctgcgggcatcaatgcaattgttgccatttcctgctactctggatacaatcaggag
gattctgtcattatgaatcagtcatcgattgatcgtggatttttccgatcgctatttttc
cgctcatacagggatgaggaaaagaagatggggacattggtcaaggaggactttggacgt
cctgatagagcttctactatgggtatgcggcatggttcttatgataagttggatgatgat
ggtcttgcccctccgggaactagagtttctggtgaggatgtaatcattgggaagacaact
cccatttctcaagatgatgcacaagggcaagcctctcgctatacaaggaaagatcacagt
accagtctccgccatagtgaaactggaatggtagatcaggttctattaacaacaaatgct
gacgggctcagatttgttaaagtaagggttagatcagtccgcattcctcaaattggggac
aagtttagcagtaggcatggtcagaagggaacagttggcatgacgtatacacaagaagat
atgccatggactgtggaaggcattactcctgatatcattgtgaatcctcatgctattcct
tctcgaatgactatcggtcagctgattgagtgtattatgggaaaggttgccgcacacatg
ggaaaagaaggtgatgccactccctttacagatgttactgtggataacatcagcaaagct
ttgcataaatgtggataccagatgcgtggttttgagaccatgtacaatggtcacactggg
cggcggcttagtgcaatgatattccttggtcccacgtactaccagagactgaagcacatg
gttgatgacaagattcattctagaggcagaggccctgtgcaaatcctcacaaggcagcct
gcggaaggtcggtcacgtgatggtggtcttcgtttcggggaaatggagcgagattgtatg
attgctcacggtgctgctcattttctcaaagagcggttatttgaccaaagtgatgcatat
agagttcatgtttgtgagcggtgtgggctgattgctattgcaaacctcaagaagaattct
ttcgaatgcagaggctgcaagaacaagactgatattgtccaggtccacattccatatgca
tgcaagttgcttttccaggagctaatggctatggctatagctccaagaatgcttacaaag
gatgtcaaacaagccaaagatcaaaagaaaaaaggagcttga
DBGET
integrated database retrieval system
