Nicotiana tabacum (common tobacco): 107818596 Help Entry 107818596         CDS       T04643                                  Name (RefSeq) uncharacterized LOC107818596   KO K06100   symplekin Organism nta  Nicotiana tabacum (common tobacco) Pathway nta03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:nta00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     107818596  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:nta03021]     107818596    03019 Messenger RNA biogenesis [BR:nta03019]     107818596 Transcription machinery [BR:nta03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      107818596 Messenger RNA biogenesis [BR:nta03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      107818596     U7-dependent histone pre-mRNA processing factors      107818596 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N HEAT_EZ HEAT_2 Adaptin_N Motif Other DBs NCBI-GeneID:  107818596 NCBI-ProteinID:  XP_016500120 UniProt:  A0A1S4CG22 LinkDB All DBs Position Un AA seq 1310 aa AA seqDB search AAKFASDVPSKLHSLRRLNNELAGADSQLLSEFLPSLLDLVSDRFSPVRKLTAEMVGYIG FKHGEFIPDIVPVLISALKDDTPAVARQAITCGIDIFRCTLVKVAIQGLFSSELDDSLES AWAWVLKFREEIYTMAFQPASDGRRLLALKFVESVVLLYTPNPSVSSEPPPALDIEGKFE QFNVSWLRGGHPMLNVGDLSVEASQSLGLLLDQLRFPAVKSITCLMIIVLINCLSAIATK RPAFYGRILPVLLSLNPSSSDGNEKHVSGVYHALKNAFVSCLNCTHPGAAPWRDRLEGAL REKRAGVQAEPVVSHDSQNNGHVELKDVSSIPEESKPSVKASDSGQSIAGTKRSGVEDNA ELVDDNLSKKRMRAAPIVLKEPKQELSANQERVSTGGSTTTRSDGDNVHLQPLVAMFGTL VAQGEKAAASLDILISSISADLLADVVMANMRNLPSNQPKVDDDEEPPLKPEIESDFKQL SSLLSDVVSQSSMLAEKGEKYAQNLVSIELELQQIKEGDEHLDSVTTNVSSDALNYASEQ APEYVTEPLSSKSTPLLMENDVSAMQSDVADIENTEDFIPGLDSVVRKDESSELIVVSSV DPAELEDGSQEQGSSLVRSSLEVVPSISTDRSEELSPKAAVTDVTSVNSSMAASVGLSPQ LLLPKISAPVIHLPDEQKDNIQKSAFTRVIDAYKQVTVAGGSQTRFSLLAYLGVEFSSEL NPWKFLQTHILSDYVNHEGHELTLRVLYRLYGRAEEDQDFISSTAAASVYETFLLTVAET LRDSFPASDKSLSRLLGEAPHLPNSVLKLLESFCCPGSSEKDEKDLHSGDRVTQGLSTVW NLILMRPPMREACLRIALQSAVHHLEEVRMKAIRLVANKLYPLTFISQQIEHFANEMLMS VSTVDHKADSNGDGSNPALQKDSASEKPTEEGPSFSITTKDVSSDTLQSSTAGSISPFLI AEGQRCMSLYFALCTKKHSLFGQIFVVYSRASEAVQQAIHQQIHMLVRTIGSSSELLEII SDPPSGSEKLLMQVLQTLTEGTVPSLQLITTIRKLYETKVKDVELLIMILPFLSKDEVLL LFPHVVNVPLDKFQGALSRILQGSAHSGPVLTPAEALIAIHRIDPEREGIPLKKVTDACN ACFEQRQTFTHQVLAKVLNQLVEQIPLPLLFMRTVIQAIGAFPSLVDFIMEILSRLVSKQ IWKYPKLWVGFVKCALLTKPQSFGVLLQLPPAQLENALSRTPGLRAPLVAHANQPHIKSS LPRSVLTVLGIESDAQGSSQAPPNQSQTGDMGNSDKEALAEKPRESSIAS NT seq 3933 nt NT seq  +upstreamnt  +downstreamnt gctgccaagttcgcttccgatgttccgtcgaagcttcacagcttgcgccggttaaataat gaactcgccggcgccgactctcagttgctctctgaattcctcccttctctccttgacctc gtatctgatcggtttagccctgttcgtaaattaaccgctgagatggttggttatattgga ttcaaacacggagaattcatacctgatattgtacccgtattgatctctgccttgaaggat gataccccagctgttgctcgacaagcaatcacttgtggaattgatatatttcggtgtact ctagtcaaagttgcaatccagggcttgttttcaagtgaattggatgattctcttgaatca gcatgggcctgggtgctgaagtttagggaggagatatacacaatggcatttcagcctgca agtgatggaagaagattgcttgcgctaaagttcgtggaatctgttgtgttactttacact ccgaatcctagtgtcagttcggagccaccgcctgctttggacattgaagggaagtttgaa caattcaatgtttcgtggcttcgtggaggtcatccaatgctaaatgttggggatttgtct gttgaagcaagtcaaagtttgggtctattgcttgatcagcttagatttcctgcggtgaag tcaattacttgcttgatgatcattgtgctcattaactgtctttcagcaattgcgactaaa aggccggctttttatggtcgtattctgccagttctgcttagcctgaatccttcaagctcc gacggtaatgagaagcatgtttctggggtataccatgctttgaagaatgcctttgtttct tgcttgaattgtacacacccaggagctgcaccgtggcgggacagactagaaggtgcactc agagaaaagagagcaggagttcaagcagaaccagttgtaagccacgattcccagaataat ggacatgtagagttgaaggatgtttcatcaatcccagaggagtcaaagccttcagttaaa gcatcggatagtggacaaagcattgctggaacgaaaagatcaggggtggaggacaatgct gaactggtagatgataatctctctaagaagcgcatgcgggcggcacctattgtcttaaag gaaccaaaacaagagctaagtgcgaaccaggagagagtttcaactggaggttctacaaca accagatcagatggagataatgttcatttgcaaccacttgttgcaatgtttggtacatta gttgcccagggtgaaaaggctgcagcatcattggatattttaatctctagcatatcagct gacttactagctgatgttgtgatggctaatatgagaaatctaccttcgaatcagccaaaa gttgatgatgatgaagagccacctctgaagccagaaattgaatctgattttaaacaattg tcatcactgttgtcagacgtcgtttctcagtccagtatgttagcagaaaaaggcgagaaa tatgctcaaaatttggtctccatcgagctggagttgcagcaaattaaagaaggagacgag caccttgattctgtcactactaatgtttcatctgatgccctaaattatgcaagcgaacaa gcaccggaatatgtaactgaacctctttcttcaaaaagtacccctctactcatggagaat gatgtctcagcaatgcaatctgatgttgctgacattgaaaacactgaggatttcatacct ggtctagattctgtagttcgcaaagatgaatcatcagagctcatagttgtttcatcagtt gatcccgctgaacttgaggatgggagccaagagcaagggtctagtttagtgaggtcatct ttggaggtagttccatcgatttcaactgataggtctgaggagcttagtccaaaagcagca gtaacagatgtaaccagcgtaaactcatcaatggcagcttctgttgggctttctccgcag ttgcttctacccaaaatatctgctccagtcatccacctacctgacgaacagaaggataat atacaaaagtcagctttcactcgtgtcattgatgcttataagcaagttacagttgctgga ggttctcaaacccgcttttctcttcttgcctatttaggtgttgagttttcttcggagcta aacccttggaaatttctacaaacacatatattgtcagattatgtgaatcatgaggggcac gagttgacattgcgtgtcctctacaggttgtatgggcgtgcagaagaagaccaggatttc atttcttcaacagctgctgcatctgtatatgaaacatttctacttacagtggcagaaaca cttagagattcttttccagcttctgacaaatctctaagtagattgcttggtgaagctcct cacttaccaaattctgttctcaagttgttagagagcttctgttgtcctggtagttctgaa aaggatgagaaggatttacatagtggagatcgagtcactcaaggcctcagtactgtgtgg aacctgattctgatgagacctccaatgagagaggcctgtctcagaattgctttacagagt gctgttcatcacttggaggaggtgcgcatgaaggcaatacggctggtcgccaacaagctt tatcctctgacattcatctctcaacaaatagagcactttgccaatgaaatgttgatgtca gtttcaaccgttgatcataaagcagactcaaatggtgatggatctaatcctgcattgcag aaggattctgcttcagagaaacccacggaagaaggaccatcattttctatcaccaccaaa gatgtgtcctctgacactcttcagtcatccactgctggaagcatatcaccgtttttgata gctgaaggccagcggtgcatgtcgctctattttgcactctgtactaagaagcactcactt tttggccaaatatttgttgtatatagtcgtgcatccgaggctgtacagcaggcaatacat caacaaatccatatgctagttcggacaattggttcttcatctgagctacttgagatcata tcagatccaccaagtggaagtgaaaagctattgatgcaggttttgcaaacgttgaccgag gggacagttccttccttacaactgataactacaatcaggaagctatatgagactaaagta aaggatgttgaacttcttattatgatacttcctttcctgtcaaaagacgaggttttgctg cttttcccacatgttgtgaatgttccattggataaattccaaggtgctctctctcgtatt ctacagggatcagctcactcaggtccagtgctaactcctgctgaagcattaattgctatc cataggattgatcctgaaagagaaggcattccattgaagaaggtcacagatgcatgcaat gcttgttttgagcagagacagacgttcacgcatcaggttcttgcaaaggtcttgaaccaa ttggttgaacaaattcctcttccgttgctgttcatgcggactgtaatacaagctattggt gcttttccatctctggtggatttcataatggagatcctctctcgtcttgttagtaagcag atatggaaatacccgaagctgtgggtaggatttgtgaaatgtgcccttttgaccaagcca caatcttttggagtgctgcttcagcttcctccagctcagcttgaaaatgcattgagtaga acacctggtctcagagctcctttagttgcacatgcaaaccaaccacacataaaatcttca cttccaaggtctgtcttaacggttcttggaattgaatcggatgctcaaggttcaagtcag gcacctcccaaccagtctcagacaggtgatatgggcaattctgataaggaggcactcgct gagaaacccagggaatcgtcaattgccagttaa

DBGET integrated database retrieval system