Nicotiana tabacum (common tobacco): 107818988
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Entry
107818988 CDS
T04643
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107818988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nta04121
]
107818988
Ubiquitin system [BR:
nta04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107818988
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
107818988
NCBI-ProteinID:
XP_016500555
UniProt:
A0A1S4CH91
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All DBs
Position
Un
AA seq
581 aa
AA seq
DB search
MAYSFPEEVLEHVFSFLSSDQDRNSVSLVCKSWYEIERWCRRRIFVGNCYAVSPSLMIRR
FPEVRSVELKGKPHFADFNLVPEGWGAYVHPWIVAMSRSYPWLEEIRLKRMVITDESLEL
ISKSFKNFKVLVLSSCDGFTTDGLASIAANCRNIRELDLGESEVEDLSGHWLSHFPDSCT
SLVSLNIACLASEISFLALERLVARSPNLRTLRINRAVPLEKLPNLLRHASQLIEFGTGA
YSADVRSDVFSNLTEAFSGCKQLKGLSGFWDVVPAYLPAIYPVCSRLTSLNLSYATSQNP
DLGKLISQCHNLQRLWVLDYIEDIGLEELAANCKDLQELRVFPSDPFAPEPNATLTEQGL
VAVSDGCPKLQSVLYFCRQMTNAALVTIARNRPNMIRFRLCIIEPRSPDYLTLGPLDTGF
GAIVENCKELRRLSLSGLLTDRVFEYIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCESLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLAQKIPRLNVEVIDERGPP
DTRPESCPVEKLYIYRTVAGPRFDTPGFVWRMDEDTAVRLS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcattcccggaagaagttttagaacacgtgttctccttcctcagctccgac
caggaccggaactccgtatccttagtctgcaaatcatggtacgagatcgaacgctggtgt
cggaggagaatcttcgtcggaaactgctacgccgtgagccctagcctcatgatccgacgg
ttcccagaagtcagatctgtagagttaaaaggaaaacctcattttgctgacttcaatctg
gtccctgaaggttggggtgcttacgtgcacccttggattgtggctatgtctaggtcttac
ccttggcttgaggaaattaggcttaagcgtatggtaattacggatgagtccttggagttg
atttctaagtcgtttaagaacttcaaggtgctagttttgtcttcttgcgatggttttact
actgatggtcttgcttctattgccgctaattgcaggaatattagagaactggacttggga
gagagtgaagtggaggaccttagtggacattggcttagccattttcctgatagctgcaca
tcacttgtttcacttaacattgcctgtttggcttctgagatcagtttcttagctttggag
cgtttggttgcccgctctcctaatttgaggactcttcggataaatcgtgctgtacccctt
gagaagcttccgaatctgcttcgccacgcttctcagttgattgaatttggtacaggcgcc
tactccgctgatgtacggtctgatgtcttctcaaacctgacagaagctttttcaggctgc
aagcaacttaaaggcttgtctgggttttgggatgttgttccggcttaccttccagctata
tatcctgtttgctccagactcacctctttaaatttgagctatgctaccagtcaaaaccct
gaccttggcaagctcataagtcagtgtcacaacttgcagcggttgtgggtgctagactac
attgaagatattggtcttgaggaacttgctgccaattgtaaggaccttcaagagctgagg
gtgtttccttctgatccttttgctcctgaaccaaatgcaaccttgacggagcaaggcctt
gtagctgtctcagatggctgcccaaagctccagtctgttttatacttctgccgtcaaatg
acaaatgcagctttagttactattgctaggaatcgtcctaacatgattcgttttcgcttg
tgtattattgagcctcgaagtcccgattacttaactcttgggccgcttgatactggtttt
ggggccattgtggagaactgtaaagaattgcggcgactttcactttctggcctccttact
gatcgtgtctttgagtacatagggacccatgctaaaaagttagagatgctttccatagct
tttgctggggacagcgatttgggactccaccatgtactctctggctgtgaaagcctccgg
aagttggagatcagagattgtccctttggagacaaggctctcttggccaatgctgcaaag
cttgagacaatgcgatccctttggatgtcttcttgttcagtaagttttggagcatgtaag
ctgctagctcaaaagattcctaggcttaatgttgaagtcatagatgagaggggtcctcca
gatacaaggccagaaagctgccctgtagaaaaactttacatatatcgaacagtggctgga
ccgaggtttgacacgcctggttttgtttggagaatggatgaagatacagcagtgagattg
tcttga
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