KEGG   Nicotiana tabacum (common tobacco): 107819366
Entry
107819366         CDS       T04643                                 
Name
(RefSeq) phytochrome A1-like
  KO
K12120  phytochrome A
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:nta00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    107819366
SSDB
Motif
Pfam: PHY PAS_2 GAF PAS PAS_8 PAS_4
Other DBs
NCBI-GeneID: 107819366
NCBI-ProteinID: XP_016500961
UniProt: A0A1S4CIZ6
LinkDB
Position
Un
AA seq 674 aa
MSSSRPSQSSTTSARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERK
PKSDRVTTAYLNQIQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGEL
PALGIGTDIRTIFTGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLII
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVM
TYKFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKV
VQDEKLPFDLTLCGSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQK
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLC
DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTD
STGLSTDSLYDAGFPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGE
KDDGRKMHPRSSFKAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIH
TKLNDLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAI
GNHLLTLVEDSSVD
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgtcatcttcaagaccaagccaatcttccaccacttcagcaagatcaaagcatagtgct
aggatcattgcacagaccactatagatgcaaagcttcatgcagatttcgaggagtcgggt
gattcctttgactattcaagctcagtgagggttacaagtgtagctggggatgagcgaaag
cccaagtcggacagagtaactaccgcttacctcaatcagatccagaagggtaagtttatc
cagccatttggctgtttgttagcccttgatgagaaaacatttaaggtcatagcattcagc
gagaatgcccccgaaatgctgaccatggttagccatgctgttccaagtgtgggtgagctt
ccagctcttggcattgggactgatatcagaacgatcttcactggtcctagtgcagctgca
ttgcagaaggctttggggttcggagaggtttctctgttaaatccggtcctcgttcactgc
aaaacttctgggaagccatattatgcaattgttcatagggttactggtagcttaatcatt
gatttcgagcctgtgaagccctatgaagtacccatgactgctgcaggggccctgcagtcg
tataaacttgcagccaaagccattactcgcttgcaggccttgcccagcggcagtatggaa
agactttgtgacactatggttcaggaggttttcgaactcacaggctatgacagggtgatg
acgtataagtttcacgatgatgatcatggagaggtggtggccgagatcacgaagcctggc
cttgatccttaccttggtttacactatcctgctacggatatcccacaagctgcacgcttt
ttgttcatgaagaataaggtccgaatgatttgtgattgccgagcaaaacatgtgaaggta
gtccaagatgagaagcttccatttgatttaacattgtgcggctctactcttagggctcct
cactactgccatctacagtatatggagaacatgagttcaattgcatcccttgtaatggca
gttgtggtcaatgacggggacgaagagggagaaagctctgattcgacacaatctcaaaag
agaaaaaggctttggggcctggtggtttgccacaacaccaccccaaggtttgttcccttc
cctctgaggtatgcatgtgaatttcttgcgcaagtctttgccatacacgtcaacaaggaa
ctggaattggaaagtcagattcttgagaaaaatatcctgcgtactcagactctcttgtgt
gatatgctgatgcgagatgctcccttaggtatagtgtcacagagtccaaatattatggat
cttgtcaaatgtgatggtgctgctttgctctataagaataagatacatcgacttggaatg
accccaagcgactttcagctgcacgatattgtctcgtggctttctgagtatcatacagat
tccacaggtttgagtacagacagcttgtatgatgctggtttccctggggctcttgctctt
ggtgatgtagtgtgtggtatggcagctgttagaatatctgataagggctggctgttctgg
tataggtcacacactgctgctgaagttagatggggtggagcaaagcatgaacctggtgaa
aaggatgatggcaggaaaatgcatcctaggtcatcattcaaagcattcctggaagttgtc
aagactagaagtgtaccatggaaggactatgaaatggacgcaatccattctttgcagctt
atactaagaaatgcatccaaggatgccgatgccatggattcaaataccaatattatccac
acgaagcttaacgatcttaagattgatgggttgcaggagctagaagcagtgactgctgaa
atggtccgcttgattgaaacagcttcagttcctatcttcgcagttgatgttgatgggcag
cttaatggctggaacacaaaaattgctgaattaaccggtcttcctgttgatgaagcaatt
gggaatcatttgctcacactcgtggaggattcctcagttgat

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