Nicotiana tabacum (common tobacco): 107819366
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Entry
107819366 CDS
T04643
Name
(RefSeq) phytochrome A1-like
KO
K12120
phytochrome A
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107819366
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Ortholog
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GFIT
Motif
Pfam:
PHY
PAS_2
GAF
PAS
PAS_8
PAS_4
Motif
Other DBs
NCBI-GeneID:
107819366
NCBI-ProteinID:
XP_016500961
UniProt:
A0A1S4CIZ6
LinkDB
All DBs
Position
Un
AA seq
674 aa
AA seq
DB search
MSSSRPSQSSTTSARSKHSARIIAQTTIDAKLHADFEESGDSFDYSSSVRVTSVAGDERK
PKSDRVTTAYLNQIQKGKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGEL
PALGIGTDIRTIFTGPSAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLII
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVM
TYKFHDDDHGEVVAEITKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKV
VQDEKLPFDLTLCGSTLRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQK
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELESQILEKNILRTQTLLC
DMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIHRLGMTPSDFQLHDIVSWLSEYHTD
STGLSTDSLYDAGFPGALALGDVVCGMAAVRISDKGWLFWYRSHTAAEVRWGGAKHEPGE
KDDGRKMHPRSSFKAFLEVVKTRSVPWKDYEMDAIHSLQLILRNASKDADAMDSNTNIIH
TKLNDLKIDGLQELEAVTAEMVRLIETASVPIFAVDVDGQLNGWNTKIAELTGLPVDEAI
GNHLLTLVEDSSVD
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttcaagaccaagccaatcttccaccacttcagcaagatcaaagcatagtgct
aggatcattgcacagaccactatagatgcaaagcttcatgcagatttcgaggagtcgggt
gattcctttgactattcaagctcagtgagggttacaagtgtagctggggatgagcgaaag
cccaagtcggacagagtaactaccgcttacctcaatcagatccagaagggtaagtttatc
cagccatttggctgtttgttagcccttgatgagaaaacatttaaggtcatagcattcagc
gagaatgcccccgaaatgctgaccatggttagccatgctgttccaagtgtgggtgagctt
ccagctcttggcattgggactgatatcagaacgatcttcactggtcctagtgcagctgca
ttgcagaaggctttggggttcggagaggtttctctgttaaatccggtcctcgttcactgc
aaaacttctgggaagccatattatgcaattgttcatagggttactggtagcttaatcatt
gatttcgagcctgtgaagccctatgaagtacccatgactgctgcaggggccctgcagtcg
tataaacttgcagccaaagccattactcgcttgcaggccttgcccagcggcagtatggaa
agactttgtgacactatggttcaggaggttttcgaactcacaggctatgacagggtgatg
acgtataagtttcacgatgatgatcatggagaggtggtggccgagatcacgaagcctggc
cttgatccttaccttggtttacactatcctgctacggatatcccacaagctgcacgcttt
ttgttcatgaagaataaggtccgaatgatttgtgattgccgagcaaaacatgtgaaggta
gtccaagatgagaagcttccatttgatttaacattgtgcggctctactcttagggctcct
cactactgccatctacagtatatggagaacatgagttcaattgcatcccttgtaatggca
gttgtggtcaatgacggggacgaagagggagaaagctctgattcgacacaatctcaaaag
agaaaaaggctttggggcctggtggtttgccacaacaccaccccaaggtttgttcccttc
cctctgaggtatgcatgtgaatttcttgcgcaagtctttgccatacacgtcaacaaggaa
ctggaattggaaagtcagattcttgagaaaaatatcctgcgtactcagactctcttgtgt
gatatgctgatgcgagatgctcccttaggtatagtgtcacagagtccaaatattatggat
cttgtcaaatgtgatggtgctgctttgctctataagaataagatacatcgacttggaatg
accccaagcgactttcagctgcacgatattgtctcgtggctttctgagtatcatacagat
tccacaggtttgagtacagacagcttgtatgatgctggtttccctggggctcttgctctt
ggtgatgtagtgtgtggtatggcagctgttagaatatctgataagggctggctgttctgg
tataggtcacacactgctgctgaagttagatggggtggagcaaagcatgaacctggtgaa
aaggatgatggcaggaaaatgcatcctaggtcatcattcaaagcattcctggaagttgtc
aagactagaagtgtaccatggaaggactatgaaatggacgcaatccattctttgcagctt
atactaagaaatgcatccaaggatgccgatgccatggattcaaataccaatattatccac
acgaagcttaacgatcttaagattgatgggttgcaggagctagaagcagtgactgctgaa
atggtccgcttgattgaaacagcttcagttcctatcttcgcagttgatgttgatgggcag
cttaatggctggaacacaaaaattgctgaattaaccggtcttcctgttgatgaagcaatt
gggaatcatttgctcacactcgtggaggattcctcagttgat
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