Nicotiana tabacum (common tobacco): 107819392
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Entry
107819392 CDS
T04643
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107819392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107819392
03110 Chaperones and folding catalysts [BR:
nta03110
]
107819392
03029 Mitochondrial biogenesis [BR:
nta03029
]
107819392
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nta04147
]
107819392
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
107819392
Messenger RNA biogenesis [BR:
nta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
107819392
Chaperones and folding catalysts [BR:
nta03110
]
Heat shock proteins
HSP60 / Chaperonin
107819392
Mitochondrial biogenesis [BR:
nta03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
107819392
Exosome [BR:
nta04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107819392
Exosomal proteins of other body fluids (saliva and urine)
107819392
Exosomal proteins of breast cancer cells
107819392
Exosomal proteins of colorectal cancer cells
107819392
Exosomal proteins of bladder cancer cells
107819392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
107819392
NCBI-ProteinID:
XP_016500985
UniProt:
A0A1S4CIG0
LinkDB
All DBs
Position
Un
AA seq
612 aa
AA seq
DB search
MSCSLNHLPAITLKNGSVHRTSKRVSGSMLNARAMAKELYFNHDGSTTKKLLAGVNLVAE
LVGVTMGPKGRNVVLGNKYGPPKIVNDGETVLKEIQLEDPLEHVGVKLVREAGAKTNNLA
GDGCTTSIVLARGLIAEGVKVTAMGANVVQVSRGIEKTAKALVSELKLMSREVEDHELED
VAAVSAGNDYAIGNMISEALRQVGKKGVVTIEKGNNTETSLEVVEGMQFDRGYLSPYFVT
DRRKRIVELHNCKLLLVDKKITNPKELVKILDNAVKEKYPVLIVAEGIEQDALAPVIRNK
LRGVLKVAAIKAPSFGERKSHCLDDIAILTGGTVIRDDMGLTLENAHKDLLGTASKVVIT
KDSTLIVTDGNTRAAVSKRVSQIQKLVENTEENFQKKILNERIARLSGGIAIIQVGAQTQ
VELKDKQLRIEDALNAARAATEEGVVVGGGCCLLRLSSKVDAIKEMLDNEDQKIGADIFK
RALSYPAKQIAKNAGVNGNIVVEKILSVDNMKYGYNAARDRYEDLMAAKILDPAKVVRCC
LEHAAAVAKTFLISDAVVIDIPEPVSRQMRRPPMPTSGPRLTDLTGGGARIFTKGSQNIK
NNTPRRQENSTI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagttgttctttgaatcatttacctgcaattactttgaaaaatggttcagtacacaga
acttctaaaagggtgtctggttctatgttgaatgcaagagctatggctaaagaattgtac
tttaaccatgatggttctaccacaaagaaacttctggcaggtgtgaatttggtggcagag
ctggttggagtcacaatgggtccaaaaggaagaaatgtagtgcttggaaataagtatggt
cctcccaagattgttaatgatggtgaaactgttcttaaagagattcagctggaggatcct
ttggaacatgttggagtaaaattggttagggaagccggtgccaagactaataatcttgct
ggcgatggttgcacaacatctatagtgcttgctcggggtctaattgctgaaggtgtcaag
gttactgcaatgggcgcaaatgttgtccaagtgtctcgtggaattgagaaaacggctaaa
gccctcgtttctgagctcaagttgatgtctagagaggttgaggatcacgagctggaagac
gttgctgctgttagtgctggcaacgattatgccatcgggaacatgatttcagaagctctt
aggcaggttggaaaaaaaggtgttgtcacaattgagaaagggaacaatactgaaaccagt
ctagaagtcgtagaaggaatgcagtttgatcgtggttatttgtcaccttattttgtaact
gatcgacgaaagaggattgtggagcttcacaattgtaagttgcttttggttgataaaaaa
attacaaacccgaaggagttggtaaaaattttggacaatgcagtaaaggagaaatacccg
gttttgatagtcgcggagggcattgagcaggatgctttggctccagtaattaggaacaaa
ctcaggggtgtcctaaaggtagctgctataaaagctccatcttttggcgagcgcaagagt
cattgcttagatgacatcgctatcttgactggaggaactgtgatcagagacgacatggga
ttgactcttgaaaatgcccacaaggacttgctgggaactgcttcaaaggtggtgattact
aaggactctacattgatagttactgatggaaatactcgagcggctgttagcaagagggtt
tctcagatacaaaagcttgttgagaacacagaagaaaatttccaaaagaaaatcttgaat
gaaagaattgcaagattatctggtggtattgccatcattcaggtgggagcacaaacacag
gttgagttgaaagacaaacaactaaggattgaggatgctctcaatgcagcaagggctgct
actgaggaaggagtagtagtgggtggtggctgttgtcttctgagactatcatcaaaggtg
gatgctataaaagaaatgctagacaacgaggatcagaagataggggctgatatttttaaa
agagcactatcatatcctgcaaaacagatagcaaagaatgctggtgtaaatgggaacata
gttgtagagaagattttgtcagtggataacatgaaatatggatataatgctgcaagagac
agatatgaagatttgatggctgccaaaattttggatcctgcaaaggttgttagatgttgc
ctagagcatgcagcagcagttgcgaagaccttcctaatatctgatgctgttgttattgac
atccccgaaccggtatccagacagatgagaagaccaccaatgccaacttcaggtccaagg
ctcactgatctcacaggtggtggagccaggattttcacaaaggggagtcaaaatataaag
aataacacaccaagaagacaagagaattcaacaatatag
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