Nicotiana tabacum (common tobacco): 107819595
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Entry
107819595 CDS
T04643
Name
(RefSeq) THO complex subunit 4A-like
KO
K12881
THO complex subunit 4
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03013
Nucleocytoplasmic transport
nta03015
mRNA surveillance pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107819595
09122 Translation
03013 Nucleocytoplasmic transport
107819595
03015 mRNA surveillance pathway
107819595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107819595
03041 Spliceosome [BR:
nta03041
]
107819595
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107819595
TREX complex
107819595
Spliceosome [BR:
nta03041
]
Complex C
Other components
EJC/TREX
107819595
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107819595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
107819595
NCBI-ProteinID:
XP_016501202
UniProt:
A0A1S4CJ15
LinkDB
All DBs
Position
Un
AA seq
254 aa
AA seq
DB search
MAEAALNMSLDDLIKKNKTGTGGKPRGRGRGGASGPGPGPARRFPNRSANRAAPYSTAKA
PEAAWNHDMFAAADQAFPFGQAGGGQAASSISTGTKLYISNLDYGVSNEDIKELFSEAGD
LKRYAIHYDRSGRSKGTAEVVFSRRQDALAAVKRYNNVQLDGKPMKIEIVGTNIATPVAP
AFNGTFGFGDANGGPRSFQARGGGFGRSRGGRGRSRGFRGGSRGRGRGDRGEKVSAEDLD
ADLMKYHSEAMQTN
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcagctttgaacatgagtttagacgatctcatcaagaagaataaaaccggt
accggaggtaaacctcgcggcagaggtcgcggcggcgcctccggtcctggtcctggtcct
gctcgccgattccccaatcgttctgctaaccgagctgcaccttattccaccgccaaggct
cctgaggcggcgtggaatcatgatatgttcgcggcggcagatcaagctttcccctttgga
caagccggtggcggtcaggcggcatcttccatatcgactgggacaaagctctatatctcc
aatctcgattacggcgtctcaaatgaggatatcaaggagctcttctcagaagctggtgac
ctgaaacgctatgctatacattatgataggagcgggagatcaaagggaacggctgaggtg
gtcttctcacgtagacaagatgcactagctgccgttaagaggtacaacaacgttcagctt
gatgggaagccaatgaagattgaaattgttgggaccaacattgccactcccgttgcccct
gctttcaatggtacttttggttttggagacgctaatggaggtcccagaagttttcaagca
agaggtggaggcttcgggaggtcacgtggtggtagaggacgcagtcgcggatttcgagga
ggcagcagaggacggggaagaggagatcgtggagaaaaggtatctgcagaagatctagat
gctgatctgatgaagtatcattcagaagcaatgcagacaaactga
DBGET
integrated database retrieval system