Nicotiana tabacum (common tobacco): 107819629
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Entry
107819629 CDS
T04643
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00040
Pentose and glucuronate interconversions
nta01100
Metabolic pathways
Module
nta_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107819629
Enzymes [BR:
nta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107819629
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
107819629
NCBI-ProteinID:
XP_016501244
UniProt:
A0A1S4CJZ5
LinkDB
All DBs
Position
Un
AA seq
325 aa
AA seq
DB search
MANFNTILSLQLFIFSSSILLIIPSCLAYNVVSFGARGDGRTDSTAPFLRAWMAACSSAK
PNNVYVPRGTYVIRPVTFTGPCRIRIDGTVVAPADYNVIGGSSFWILFYKVSRLSVYGGT
IDAKGHGFWSCRRSGHSCPPGARSITFLWCDNVLLSGLKSLNSQIMNVAIDYSSHVRVQN
VRIRSPSGSPNTDGIHVENSRDVTIKDSIIQTGDDCISIGPGSMNMLIQKIGCGPGHGIS
IGSLANSYNEAGVQNITVANSVFTKTQNGVRIKSWARPSDGYAKNLMFRNLVMRNVGFPI
LIDQNYCPEDNCPHQAYNRPQLTCD
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggctaacttcaatacaattctatctttgcaacttttcattttctcttcttccatatta
ctaataataccttcttgtttagcttacaatgtggttagttttggggctagaggagatgga
aggacagactcaaccgcgccatttcttcgtgcttggatggcagcctgcagctcagctaag
ccgaataacgtttatgttcctcgaggaacgtacgttattaggccagtgacattcactggc
ccatgccggatccgaattgacggaactgtcgttgctccggcagattataatgtgattgga
ggttctagcttttggattttgttttataaagtaagtagactttctgtctatggtggaaca
attgatgctaaaggacatggtttttggtcttgtagaagatctggtcattcttgccctcct
ggagctaggtcaataacatttttgtggtgtgataatgtactgctaagtggattgaaatca
ttgaacagccaaataatgaatgtggcaattgattatagtagccatgtgagagtccaaaat
gtgagaataagatctccaagtggaagtccaaatacagatgggattcatgtggagaattcc
agggatgttacaatcaaagatagcatcatccaaactggagatgactgcatttccattggc
cctggctccatgaatatgttgattcagaagattggttgtggccctggacatggcatcagc
atagggagtttagcaaacagctataacgaagcaggagttcaaaatataacagtggcaaat
tcagtattcactaaaacacaaaatggtgtaaggataaagtcatgggcaaggccaagtgat
ggctatgctaaaaatctcatgttcagaaaccttgttatgaggaatgttgggttccccatc
ctcattgatcaaaactattgccccgaagacaactgtcctcaccaggcatataaccgaccg
caacttacttgtgattga
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