Nicotiana tabacum (common tobacco): 107819772 Help Entry 107819772         CDS       T04643                                  Name (RefSeq) uncharacterized LOC107819772   KO K10643   CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] Organism nta  Nicotiana tabacum (common tobacco) Pathway nta03018   RNA degradation Brite KEGG Orthology (KO) [BR:nta00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     107819772  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:nta03000]     107819772    03019 Messenger RNA biogenesis [BR:nta03019]     107819772    04121 Ubiquitin system [BR:nta04121]     107819772 Enzymes [BR:nta01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      107819772 Transcription factors [BR:nta03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     107819772 Messenger RNA biogenesis [BR:nta03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      107819772   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      107819772 Ubiquitin system [BR:nta04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     107819772 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RRM_1 Nab2-like_zf-CCCH_ zf-RING_4 Rtf2 Nup35_RRM_2 Motif Other DBs NCBI-GeneID:  107819772 NCBI-ProteinID:  XP_016501406 UniProt:  A0A1S4CK68 LinkDB All DBs Position Un AA seq 977 aa AA seqDB search MEMAEKDETEGRCPACRSPYNKEKIVGMAANCEKIAGMEKKSTSRKGKSKTADLRKQLTS VRVIQRNLVYIVGLPLSLADEDLLQRKEYFAQYGKVQKVSMSRTAAGAIQQFANNTCSVY ITYSNEEEAVRCIQSVHGFVLDGRPLRACFGTTKYCHAWLRSVPCTNPDCLYLHEIGSQE DSFTKDEVISAYTRSRVQQITGAINSMQRRSGSVLPSPADDYCNNSSASAGQPISKTAAN NSATNARVSPPNSSSGRSAALPAGALWGTRASNNQLPPATAPSSNGLPPASAPSSNGPLK QKAETCSPLTFSTAVANTSQVLSLPTESGKKFIHSKESGTSQEKGKTEMLEPVKQSAGAD DGTYSSEESTIAVRTASSFLNNQLHITPALEDQGKQITPSRATNAFDLPLMSNGPGLSED SCDARDVEINIECSDLSSFSIDRQQKSHYEKSREPSPPHMNGKSMTSADEVCNSRETSNL RLETQAQGRLDTTPEMEDDLLSFNAQRHRDPEVIVEKSYSSSPSISLHSSVQLKGYSPHL ANGVGPIKANMQSFDERTDSVLQPSSIGELPNGYPENAFNIVGNLGNYPLSNDGKGMNMD RFEAEAEAASVDHSTTVDRGENSIISNILSMDFDPWNESLTSQNLAKLLGETDNQQGSLR VSNSRKLQSSNQSRFSFAREEEPMNPLTHPQPSLSYTERSYSHHPLGQDFPNSRSYQLDG FGTQNGFSLFNNEERNGFTNNYSQLSSNKLSVSRSQMTAPPGFAAPNRAPPPGFISHDKM EQNYGSLSGNHILDTTSLLRNEYQAPPIGNVNNGDIEFMDPAILAVGKGRVPNGLSVSSI DMSSSFPPQLSAFENEARLQLLMQRSLSLHQNQRFSDMGDNFTPFNDAYGISSRVVEQTL ANNLSPFSQLNVTQSRNSVMSNGQWDGWNGAQSANDLGMAELLRSERLGYNKFFNGYEES KFRMPNSGELYNRTFGI NT seq 2934 nt NT seq  +upstreamnt  +downstreamnt atggagatggctgagaaggacgagacagaagggcggtgtcctgcatgccgcagtccatat aacaaggaaaagattgttggcatggcagcaaactgtgaaaagatagcgggcatggagaaa aaatcgacatctcgaaagggtaaaagtaaaacagctgatttgcgaaagcaacttaccagt gtgcgagtcattcaaaggaatcttgtctacattgtggggttgcctctcagtttagctgac gaagatcttctacagcggaaagaatattttgctcagtatggaaaggttcagaaggtttcc atgtctcggacagctgctggcgccattcaacagtttgcaaataatacatgtagtgtatat attacctattcaaatgaggaggaagcggtccgttgtattcagtctgtacatggatttgtt ttggacggtagacctctaagggcttgcttcggaaccacaaaatactgtcatgcttggctg aggagtgtgccctgcaccaatcctgattgtttatatttgcacgagattggatcacaagag gatagctttactaaagacgaagtaatatcggcttacacaaggagtagagttcaacaaatt actggtgccattaatagtatgcaacggagatcagggagtgttttaccatcaccagcagac gattactgcaataacagctctgcttctgcaggacaacctattagtaaaactgctgcaaat aattcagcaaccaatgccagagtctctccaccaaatagcagctctggtagatcagctgct cttccggccggcgctttatggggaacgcgtgcgtcaaataaccaactgccgccagccact gcaccaagttctaatggactgcctcctgccagcgcaccaagttctaatgggcctcttaaa cagaaggctgagacctgtagcccactgacattctctacagctgttgcaaacactagtcag gttttgtcattgcctactgaatcaggaaagaaatttattcacagcaaagaaagtggcact agtcaagagaaaggtaaaacagagatgttagaacctgttaagcagtccgcaggtgcagat gatggaacctatagttctgaagaatccactatcgccgtacgtactgcttcttcattcctg aacaatcagttacatatcaccccagctttggaggaccaaggtaaacaaatcacaccatcc agagctacaaatgcctttgatcttcctttgatgtctaatggacctggtttatcagaagat tcctgtgatgccagagatgttgagatcaatattgaatgctcagatttgtcatcatttagc attgatagacagcaaaaatcacattatgagaaatcaagggaaccttcgccgcctcatatg aatgggaaatctatgacttctgcagatgaagtttgtaactcaagagaaacgtctaatttg agactggaaacacaggctcaaggaagactagacacaactcctgaaatggaggatgatttg ctatctttcaatgcacagagacatagggatccggaagtaattgtagagaaaagctactca tcaagtccttccatctctttacactcttcagtgcagcttaagggttattctccacatctt gccaatggtgttggacctattaaagccaacatgcaatcgtttgacgaaagaactgattca gtattacagccttctagcattggagaacttcctaatggataccctgaaaatgcattcaat attgtgggtaatttgggaaattatccactgtctaatgatggtaaggggatgaatatggat aggtttgaagctgaagctgaagctgctagtgtggaccatagtactactgtagatagggga gagaacagtataatatctaatattttgtctatggattttgacccatggaatgagtcgtta acctctcagaacttggctaagttgttgggagagactgataaccaacaagggtctcttaga gtatcaaactcaagaaaattacagagcagcaatcaatcaaggttctcttttgcaagggag gaggagccaatgaatccattgactcatcctcaaccatctttaagttacactgagagaagt tatagtcatcatcctctcggtcaagattttccaaatagtagaagctatcagcttgatggt tttggtactcagaatggtttctctctatttaataatgaggaacgtaatggttttaccaac aattattctcaactctcttctaacaagctgtcagtgtcgagatctcagatgactgcgcct ccaggatttgcagcgccaaacagggccccacccccaggctttatttctcatgataaaatg gaacagaattacggttctctctctggtaatcacattcttgataccacctccttattgcgc aatgaatatcaggctccaccaattggaaatgtcaacaacggggacattgagtttatggat cctgcaatattggcagttggtaaagggagggttccgaatggccttagtgtctcaagtata gacatgtcttcaagttttcctccacagcttagtgctttcgaaaatgaagcaagacttcag ttgctgatgcaaagatctctctctctgcatcagaaccagagattcagtgatatgggggat aactttactccattcaatgatgcttatggaatttcttccagggttgtggagcaaactctg gccaacaatctttcaccattttcacagctcaatgttacccagagcaggaactctgtcatg tcaaatggccagtgggatggctggaatggtgcccagagtgcaaacgatttgggcatggct gaactcctccgaagtgaaaggctgggttataacaagttctttaatggatatgaggaatca aagtttcgcatgcccaattcaggcgaactgtataacagaacattcgggatataa

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