KEGG   Nicotiana tabacum (common tobacco): 107820055
Entry
107820055         CDS       T04643                                 
Name
(RefSeq) RNA polymerase II transcription factor B subunit 5-like
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03022  Basal transcription factors
nta03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107820055
  09124 Replication and repair
   03420 Nucleotide excision repair
    107820055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nta03021]
    107820055
   03400 DNA repair and recombination proteins [BR:nta03400]
    107820055
Transcription machinery [BR:nta03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     107820055
DNA repair and recombination proteins [BR:nta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     107820055
SSDB
Motif
Pfam: Tfb5
Other DBs
NCBI-GeneID: 107820055
NCBI-ProteinID: XP_016501747
UniProt: A0A1S3WZX5
LinkDB
Position
Un
AA seq 70 aa
MVNAIKGLYISCDVPMAQFIINMNAALPQSQKFIIQVLDNTHLFVRSDVAGMIRSAIAEF
REANTYEKPA
NT seq 213 nt   +upstreamnt  +downstreamnt
atggtgaacgccatcaaaggattgtacatatcatgtgatgtacccatggcacagttcatt
atcaatatgaatgctgcattgccccagtcacaaaagttcataatacaggtcttggacaat
acacatctctttgtacgatctgatgttgctggaatgatccgtagtgctattgcagaattt
agagaggcaaatacctatgagaagcctgcttag

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