Nicotiana tabacum (common tobacco): 107820519
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Entry
107820519 CDS
T04643
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107820519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107820519
04121 Ubiquitin system [BR:
nta04121
]
107820519
03036 Chromosome and associated proteins [BR:
nta03036
]
107820519
03400 DNA repair and recombination proteins [BR:
nta03400
]
107820519
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
107820519
Ubiquitin system [BR:
nta04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
107820519
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
107820519
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
107820519
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-HC5HC2H_2
PHD_NSD
RTT107_BRCT_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
107820519
NCBI-ProteinID:
XP_016502296
UniProt:
A0A1S4CML9
LinkDB
All DBs
Position
Un
AA seq
466 aa
AA seq
DB search
MRCIVGREDIFHERDVKRQTRLSSGSSQMSLESHGHIQLRCPSSEIVANSNCNMEYKNSE
SPSVAQPKSVSDQHALKGSVCCFCHSPKTTKGTGQFLYYANGKEVVENVSSPSKVICVHS
KCIEWTPQVFYDGDTIKNLKSELARAAKLKCSSCGMKGAALGCYIKSCRRSYHVPCAFEI
QDCRWDMDNYLMLCPIHKSTKFPTEKSNSRKHVRREVHRATSDIPPLTTEQLSFWARSSG
GPKEWVLCGSALSSEEKYMLVTFANMCGATVCKFWKPNVTHVVAATDEKGACTRTFKVLM
AILSGKWILTMDWVKACIAANGPVKEEPYEISLDNHGCSGGPKAGRLWASTNAPKLFDGF
RFYLSGDFVPTYKVDLLDLVEKAGGASIQSKEQLVEQTHAAQETHPPYLVVYNCDPPRGC
TFEEESNILQQRLAEAEDLAKQIGCQVIQHTWILECVAACKLVPFC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgcatagtcgggcgtgaagatatttttcatgaaagggatgtgaagaggcaaacg
agactaagttctggttcgtcacaaatgagcttagaaagtcatggtcatattcaactaaga
tgtcctagttctgaaattgttgctaattccaactgcaatatggagtataaaaatagtgaa
tctccttctgttgctcagccaaaatcagtttcagatcaacatgctctgaaaggaagtgtt
tgttgtttctgtcattcgcctaagaccacaaagggaactggacagttcttgtactatgct
aatggaaaggaagtggtggaaaatgtctcttctccttccaaagtcatatgtgtgcacagt
aaatgcattgaatggacacctcaagtattttatgatggagatactataaagaacttgaaa
agtgaattggcaagagctgcaaaactcaaatgtagtagttgtggcatgaaaggtgcagca
cttggctgctacataaaatcttgccggaggagttatcacgtgccctgtgcatttgaaatc
caggattgtcgatgggatatggacaactatctcatgctgtgcccaattcataaatctact
aaatttccaactgagaagtcaaattccaggaagcacgttaggagggaagtgcatcgagca
acttcagatattcctcctctaaccactgagcaattgagtttttgggcaagatcatcaggt
ggacccaaagaatgggttctttgtgggtctgctctatcctcagaagagaagtatatgttg
gtgacatttgctaatatgtgcggtgcgactgtgtgcaagttttggaaaccaaatgtcaca
catgttgttgcagcaacagatgaaaagggtgcatgcaccagaacatttaaagttctcatg
gcaattttgagtggaaaatggatcctaacgatggactgggtaaaagcttgtattgcagca
aatggtccagtaaaggaagaaccttatgaaataagtctagacaatcacggctgttctggg
ggccccaaagctggaaggctctgggcctcaactaatgcgccaaagctttttgatggtttc
aggttttatttgagtggggattttgtgccaacttacaaagttgacctgttagatctagtt
gagaaggctggaggtgctagcattcagagcaaggaacagttggtggaacagactcatgct
gcacaggaaactcacccaccttatctagttgtatacaactgtgatcccccacggggttgc
acgtttgaagaagaaagcaatattttgcagcaaagattagctgaagctgaggatctcgcc
aagcaaattggttgtcaggtcattcagcatacttggattctggagtgtgttgctgcatgt
aaactggtacctttttgctga
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