Nicotiana tabacum (common tobacco): 107820973
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Entry
107820973 CDS
T04643
Name
(RefSeq) cyclic nucleotide-gated ion channel 2-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107820973
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nta04040
]
107820973
Ion channels [BR:
nta04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107820973
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Paralog
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
IQ
IQ_SCN5A_C
TMEMspv1-c74-12
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
107820973
NCBI-ProteinID:
XP_016502827
UniProt:
A0A1S4CNI6
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All DBs
Position
3:205269341..205292099
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AA seq
709 aa
AA seq
DB search
MSSRQDLRFFLSRWFGIFRRRSVQPDNSDDNEDDSNPISNSIECYACTQVGVPVFHSTSC
DQANPPEWEASAGSSLVPIQNRTNNSRTGKSRSSHNRHPSGPFGSVLDPRSKRVQRWNRF
ILLARGMALAVDPLFFYALSIGRGGSPCLYMDGGLAAIVTVIRTCLDAVHLFHLWLQFRL
AYVSRESLVVGCGKLVWDARAIAAHYVRSVKGFWFDTFVVLPVPQVVFWLVVPKLIREEQ
IKLIMTILLLMFLFQFLPKVYHSISLMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAG
GCWYVLSIQRVASCLRQQCEQKASCNLSLSCSEEVCYQFLLPTGTVGNPCAGNSTTVMRK
PLCLDVNGPFPYGIYKWALPVVSSRSVTVKILYPIFWGLMTLSTFGNDLEPTSHWLEVIF
SICLVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMKRRQLPSQLRQRVRHF
EHQRWAMMGGEDEMELVKDLPEGLRRDIKRFLCLDLIKKVPLFHSLDDLILDNICDRVKP
LVFSKDEKIIREGDPVHRVVFIVRGRVKSSQNLSKGMVATSILEPGGFFGDELLSWCLRR
PFIDRLPASSATFTCIESTEAFGLDANHLRFITDHFRYKFANERLKRTARYYSSNWRTWA
AVNIQLAWRRYMVRTSRPVNQVTENGDSDHRLRKYAAMFLSIRPHDHLE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcgccaagacctccgcttcttcctctcaaggtggttcggcatattccgacga
agatcagttcaacctgacaacagcgacgacaacgaagatgacagcaacccaatctcaaac
tccattgaatgttatgcatgcactcaagttggcgtcccagttttccactccactagttgc
gaccaagctaacccaccggagtgggaagcttcagccggttcctcgctagttccaattcag
aaccggactaataattccagaaccggaaaatcccggtccagtcacaaccggcatccgtcg
ggtccattcggaagtgtgttagaccctcgaagcaagcgcgtgcagagatggaatcgattc
attttgttggcacgtggcatggccttagccgttgatcctctcttcttttacgccttatcc
atcggccgtggtggatcgccgtgcttgtacatggacggcggacttgcggctatcgtcacg
gtgatacggacttgcctcgacgccgtacacctcttccacttgtggttgcagtttcggttg
gcgtacgtgtcgagagagtcgctagttgttgggtgtgggaaactcgtgtgggacgcgcgt
gcgattgctgctcactatgttcggtccgttaaaggattctggttcgatacttttgtcgtc
ctacccgtccctcaggttgtattttggctggtggttccaaaactaataagagaagagcag
atcaagcttataatgacaatccttctactaatgttcttgttccagttcctccccaaagta
tatcacagcataagcttaatgagaagaatgcaaaaggttactggatatatttttggtacc
atttggtggggatttggccttaatctcattgcttattttattgcttctcatgttgctggg
ggttgctggtatgtactatctatacaaagagtagcttcatgtctaaggcagcagtgtgaa
cagaaagcttcttgtaatctgtctttgtcatgctcagaggaggtttgttatcagtttcta
ttgccaacaggaactgtgggaaatccatgtgctgggaactcaacaacagtgatgaggaag
ccactgtgtttagatgttaatggaccatttccatatggaatatacaaatgggctctacct
gttgtttctagtaggtctgtcactgtgaagattctttatcccatcttttggggattgatg
acccttagtacatttggcaatgacttagaaccgacgagtcattggctagaagttatcttc
agtatatgccttgtgcttagtggattgatgctcttcactctgttgatagggaatatccag
gtgtttttacacgcggtgatggcaaagaagagaaaaatgcaattgaggtgcagggatatg
gaatggtggatgaagaggagacaattaccatcacaattgagacaaagagttcgccacttt
gaacaccagagatgggctatgatgggtggagaagatgagatggaactcgtaaaagacttg
ccagaaggacttcgaagggatatcaaacgctttctttgccttgatcttattaaaaaggtt
cctctgttccatagtttggatgatctaattctagacaacatctgtgatcgagttaagcca
ttagtcttctccaaagatgagaagatcattagagaaggagatcccgtgcaccgggtggtg
ttcattgttcgtgggcgagtaaaaagtagccaaaacctcagtaaagggatggtcgcaacg
agcatacttgagcctggaggcttctttggagatgagcttctttcctggtgcttacgccgt
cccttcattgacagacttccagcttcttcagcaacctttacttgcatagaatccacagaa
gcatttggcttagatgcaaaccatctacgatttatcacagatcacttcagatacaaattt
gcaaacgagaggcttaagcgaacagcaaggtattattcatccaattggagaacatgggct
gctgtgaatatacagttagcttggcgtcgttacatggtgaggacaagccgtcctgtgaat
caggtaacggagaatggggatagtgatcatcgccttcgaaagtatgctgcaatgttcttg
tcaatcaggccacatgatcatcttgagtag
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