KEGG   Nicotiana tabacum (common tobacco): 107821518
Entry
107821518         CDS       T04643                                 
Name
(RefSeq) UBP1-associated proteins 1A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107821518
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107821518
   03041 Spliceosome [BR:nta03041]
    107821518
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107821518
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107821518
Spliceosome [BR:nta03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    107821518
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8
Other DBs
NCBI-GeneID: 107821518
NCBI-ProteinID: XP_016503436
UniProt: A0A1S4CQU8
LinkDB
Position
5:complement(112829568..112830897)
AA seq 341 aa
MGTKRKSSTSTPKFQPEEQKRKLELESSSSEQEEEEESEYEPEAAPESESSSSEEEEESE
DEATKRQSVRKLLEPFTKDQIIQLFKTAASNDPSILSRVKTLADTDPTHRKIFVHGLGYD
TTLYQLHAAFEPYGEIEECKLITDKVTQRAKGYAFVLFKTRVGAKRALKEPQKKIGNRNT
SCQLAAVGPAGAGSDSVENATNSNANHVIQQIDSMNYGFGMSPGILSGASMNGLPLLMGQ
NMGFGVNPMLGLSQAGLAASGFNPSFAGIGAGYGLNSINPGVIGSRYGAQPALQGLGTYP
SAQIGQHSFGGTAAMTTVTTPAKDSSGIGSAGVTYPSYLGR
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgggcacgaagcgaaaatcatcaacttcaaccccaaaattccaacctgaagaacaaaaa
cgtaaacttgaacttgaatcttcatcctccgaacaagaagaagaagaagaatctgaatac
gaacccgaggccgcacccgaatccgaatcatcatcttctgaagaagaagaagagagcgaa
gacgaggcgacaaagcgacagagtgttcggaaacttctagaacctttcactaaagaccaa
ataatccagctatttaaaacggccgcttcaaacgacccatcaattctttctcgggtcaaa
accctagccgataccgacccgactcaccgtaaaatctttgttcacggactcggctacgac
acaactttgtaccaacttcacgctgccttcgaaccctacggcgaaatagaagagtgtaaa
ctgattactgataaagttacccaaagagctaaaggatacgcctttgtgctattcaaaacc
cgagtcggggcaaaaagggctttaaaggagccccagaagaagattgggaatcgtaatacc
tcttgccaactggcagccgtgggacccgctggggctggttcagattcggtggagaatgct
actaatagtaatgcaaatcatgttatacagcaaattgatagtatgaattatggttttgga
atgagtcctgggatattgagtggcgcgagtatgaacgggttgccccttttgatggggcaa
aacatgggctttggagtgaatcctatgctgggattaagccaggctggtttagctgcatcg
ggatttaatccttcgttcgcagggattggtgctggttatggtttaaatagcattaatccg
ggcgttataggtagtagatatggtgcacaaccagctttgcagggattagggacttacccg
agtgcgcaaatcgggcagcattcatttggaggaacagcagcaatgacaacagtaactaca
cctgcaaaagattcctctggcattgggtcagcaggggtgacctatccctcgtatttgggc
cgttag

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