Nicotiana tabacum (common tobacco): 107821736
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Entry
107821736 CDS
T04643
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 1
KO
K03255
protein TIF31
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
nta03012
]
107821736
Translation factors [BR:
nta03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107821736
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Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_MalT
TPR_9
CLU
TPR_8
Motif
Other DBs
NCBI-GeneID:
107821736
NCBI-ProteinID:
XP_016503673
UniProt:
A0A1S4CRE3
A0A1S4CRD3
LinkDB
All DBs
Position
19:107417573..107433107
Genome browser
AA seq
1897 aa
AA seq
DB search
MAPNKNGRGKTKGDKKKKEEKVLPVVMDIMINLPDETQVILKGISTDRIIDVRRLLSVNT
TTCNITNFSLSHEVRGPRLKDTVDVSALKPCLLNLVEEDYDEESAAAHVRRLLDIVACTT
SFGPSGSSGKELKSETSKNARGAQDNKSAKKPNKARANDKLPSPPQSPTPTPAQQLGKDA
AAVDVEGEMSNTCPKIGSFYEFFSLSHLTPPLQFIRRATRQQDDGVLPDGHLFSLEVKLC
NGKLVIIEACRKGFYNFGKQGILCHNLVDLLRQLSRAFDNAYDDLMKAFLERNKFGNLPY
GFRANTWLIPPVGAQLPSIFPPLPVEDEKWGANGGGLGRDGKSDLLPYANEFLNVASMPC
KTTEERQIRDRKAFLLHSLFVDVAIFRAISAVKHVMENVKPAHCDSNGEIIFNETVGDLS
VFVTKDASNASCKIDTKIDGFQATGIAMKNLMERNLLKGITADENTAAHDIATLGVLNVR
HCGYIATVKVQGKENDKVGNPLQSMELPDQPDGGANALNINSLRLLLHKKVDNKVGHSKP
SAAEEMTCYQAFVKRILEESLTKLEEEKIEGDSFIRWELGACWIQHLQDQKKSEKDKKNP
VEKTKNEMKVEGLGIPLKSLKNKKKNIDGANMESQPESFKCVANGVGGGSEKGVPQSGES
QFESDTDQNQLVLKTLLSDAGFTRLKESETGLHLKSLEELIDLSQKYYNEVALPKLVADF
GSLELSPVDGRTLTDFMHTRGLRMRSLGQVVKLSEKLSHVQSLCIHEMIVRAFKHILQAV
IASVVDIEDMAAILAAALNMMLGVPENDESNESHGVDSLIWKWLELFLKKRYEWDVGSLK
YKDVRKFAVLRGLCHKVGIELVPRDYEMSSPNPFQKLDIVSLVPVHKQAACSSADGRQLL
ESSKTALDKGKLEDAVSYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIY
QQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPN
TAATYINVAMMEEGLGNVHVALRYLHKALKCNQKLLGPDHIQTAASYHAIAIALSLMEAY
PLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTKKPDASIASK
GHLSVSDLLDYINPSPDAKGRDVGSKRKGFVSKAFISQVKGQSDQSNVASPNSDTPKDVL
KEESDEEKQIVEDHTDPKMNLEPVDTVVKSHHNGDEEIAEDKPVHLVKEASIEKPVVREV
LSEPSAEAEDGWQSVQRPRSGGFYGRRRRQRRQTISKVIGYQKKDSVSEVDYAKLKNNYQ
ASKYYVLKKRTSPGSYADYYIAKNQSPGTKLGRRVIKAVTYRVKSVSSSVREAVPEISTT
GGDLLATSSEQVQVSATKEVVSLPKRSSIVNLGKSPSYKEVALAPPGTISMLQERVSENE
VPDNPDVLKVGEESNGAEENSETMRRDAESIKQENIQDLVADSADQVQNETEDTDDKEEI
QPSDLKGGEISDVISANASVQPGHVDVSPMEQGNVQTHNVPASDDSPEVDFCEKDSSSNL
DPSCISSLTLQDMDHLKVTVASSLTCDASRELSRKLSASAAPFSPSPAIARAAPLPMNIN
LPSPPGTLPPVGPWSMNISLHQGPPTMLPNPMCSSPHHLYPSPPHTPNMMHPLRFMYPPY
SQPQTIPPSTFPMSSSNFHPNHYAWQCNIAPNASEYVPATVWPGCHPVEFSISPPVIEPI
TDSISAAKEPSDNPESIILATSLPVDLNTGDEVKEEVNLPASDTGESLAAVGSKERASST
SDSHFVTLSSNQSEEGNGSNENAVQRNPTETDKEKTFNILVRGRRNRKQTLRMPISLLKR
PYSSQPFKAVYSRVIRETEVPRSTSFDPQEHGIATAT
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaaacaagaatggtcgtggcaagacgaagggagacaagaagaagaaagaagag
aaggttcttccagttgtaatggatataatgataaaccttccggacgagactcaagttatt
ttaaagggaatatctacggatagaattatcgatgttcgtcgattactatcagtgaacaca
acaacttgtaatatcaccaatttctccctatctcatgaggtaagaggcccacgtttaaaa
gatacagtggacgtttccgcactgaagccctgcctcctgaatcttgtcgaagaggattac
gatgaagaaagcgccgcggcgcacgttagaaggctgctggatatcgtcgcttgtacgacg
agttttgggccgtcgggaagtagtggcaaagagttgaaaagtgagactagcaagaatgcg
cgaggcgcgcaggataacaagagcgccaaaaaacccaacaaggctcgggcaaatgataag
ctaccgtcgccgccgcaatcgccgacgccgacgccggctcagcagctgggtaaagatgcg
gcggcagtggacgtagagggagagatgagcaatacgtgccctaagattggaagcttctat
gagttcttctcgctttctcatctcacgccccctcttcagttcataagaagggcaacaaga
cagcaagatgatggagttttgccagatggtcatcttttctctcttgaagtgaaactttgt
aacggaaagctggttatcattgaagcttgcagaaaaggattttacaactttggaaagcag
ggaattctttgtcacaatcttgttgatttgttgagacaactcagtagagcatttgacaat
gcttacgatgatctcatgaaagcattcttagagcgtaataagtttgggaaccttccctac
ggtttcagagccaacacatggcttataccacctgtgggagcacagttgccatctatcttc
ccacctctacctgtggaggacgaaaaatggggagcaaatggaggtggtctaggccgagat
ggaaaatctgatttgttaccttatgccaatgaatttttgaatgttgcatccatgccttgt
aagacaacagaggagaggcagatccgagacaggaaggcttttcttcttcatagtttattt
gttgatgtagccatttttcgagcaatttcagctgtaaagcatgtcatggagaacgtcaaa
ccagctcattgtgattcgaatggagaaatcatttttaatgagacagttggggacttgagc
gtgtttgttaccaaagatgcttcaaatgctagttgcaaaatagataccaaaattgatgga
tttcaagcaactggaatagctatgaagaatctgatggaaagaaatctactgaaggggata
actgctgatgaaaatactgctgcccatgatattgctactttaggtgttttgaatgtaagg
cattgtggttatattgcaactgtaaaagttcaaggaaaagaaaatgacaaagtgggcaat
ccactgcaaagcatggaacttcctgatcagcctgatggtggtgcaaatgccctcaatatc
aacagtttacgcttgctccttcacaagaaagtggataacaaggtagggcattcaaaacct
tcggcagctgaagagatgacttgctatcaggcatttgtaaagagaatactagaagagagt
cttaccaagcttgaagaagagaaaatagaaggtgactctttcatcagatgggaacttggt
gcatgctggatacaacacttacaagatcagaagaaatcagagaaggacaaaaaaaaccca
gttgagaagacaaaaaatgagatgaaagttgagggacttggaatacctcttaagtcactc
aagaacaaaaagaagaacatagatggggctaacatggaatcccagcctgaaagcttcaaa
tgtgtcgcaaatggtgtaggagggggatcagaaaaaggtgtcccgcagtctggggagtct
cagtttgagagtgatacggatcaaaatcagcttgtactcaagacattgttgtctgatgct
ggttttacaaggttaaaagagtcggagactggacttcaccttaagtctttggaagagctg
attgatctgtcacagaagtattacaatgaagttgcccttccaaagctggttgctgatttt
ggttctttggaactctcaccagtagatggtcgaactttaactgatttcatgcatacccgg
ggtctacgtatgcgttctcttggacaagtagttaaactttccgagaagttatcacacgtt
caatctctttgtatacacgagatgatagtccgggcctttaaacatattttgcaagcagtt
attgcatctgttgttgacattgaggatatggctgcgatacttgctgctgccttgaatatg
atgcttggggtacctgaaaatgatgaatcaaatgagtctcacggcgttgattctttgatc
tggaaatggctggaactatttttgaagaagcgatatgaatgggatgtagggagcctaaag
tacaaagatgtgaggaaatttgcagttcttcgtggtttatgccataaggtgggaattgaa
ctggttccaagagattatgaaatgagttccccaaatccttttcagaaattagacattgtc
agcctagtaccagtgcataagcaagctgcttgctcttctgcagatggtaggcagcttttg
gaatcatccaaaacagctttagataagggaaaacttgaagatgctgtcagctatgggact
aaggctcttgctaagctggttgcagtatgtggtccatatcatcgaatgacagctggagct
tatagccttctagctgttgttctgtatcacaccggtgattttaatcaggccacaatctat
cagcaaaaggccttggacataaatgaaagagagttgggcctcgatcacccagacaccatg
aaaagttatggtgatcttgcagttttctattaccgacttcaacacacagagttggctctc
aagtatgtaaaacgagctctttatctgttgcatctcacatgtggcccctcacatccaaac
actgcggcgacatatataaatgtggcaatgatggaggaagggcttggtaatgtgcatgtt
gccctcagatatctccataaagctttgaagtgtaaccagaagttacttggtcccgaccat
attcagacagctgcaagttaccatgctatagcaatcgcactctctttgatggaagcttat
cctttgagtgttcagcatgagcaaacaaccctgcagatactccgagcaaagcttggtcca
gatgatcttcgcactcaggatgctgctgcatggctcgagtattttgagtcaaaggctttt
gaacagcaagaagctgctcggaacggaaccaagaagcctgatgcatcaatagccagcaag
ggtcatttgagtgtgtcagatttgctcgactacatcaatccaagtcctgatgccaaaggg
agagatgttggatcaaaaagaaaaggttttgtctcaaaggcttttatttctcaggtgaag
ggacaatctgatcaaagcaatgttgcctcaccaaactctgacactcctaaagatgtccta
aaagaagagtcagatgaggagaaacaaattgttgaagatcatactgatcccaagatgaat
ttggaacccgttgacacagtagttaaatcccatcacaatggagatgaagaaattgctgag
gacaaacccgttcatttggtgaaggaagcttcaattgagaagcctgttgtccgtgaagtc
ttatctgaaccttctgctgaagcagaagatggatggcagtcagtgcagagaccaaggtca
ggtggtttctatggacgaagacgaaggcagaggcggcaaaccatcagcaaggtcattggt
taccagaaaaaggactctgtttctgaggttgattatgctaaactgaagaataactatcaa
gctagtaaatattatgtcttaaagaaacggacatcaccaggaagttatgcagattattac
atagcaaaaaatcaatctcctggtaccaaacttggtcgaagagtcataaaagctgtaacc
taccgtgtcaagtctgtgtcatcatctgtcagagaggctgttcctgagatctccacaact
ggaggagatttgttagctacttcgtcagagcaggtccaagtttctgcaacaaaagaggtt
gtgtcactaccaaagagaagttcgattgtaaacctaggaaaatctccttcctataaggaa
gtggcactcgccccgccaggtaccatctctatgttgcaggagagagtttctgaaaatgaa
gttcctgataatccagacgttctaaaagttggggaggagagcaatggagcagaagaaaat
tctgaaacaatgagaagagatgcagaatccataaagcaagagaacattcaggatcttgtt
gcagattctgctgatcaagtacaaaatgaaacagaagatactgacgataaagaagaaatt
caaccgagtgatctcaaaggtggtgaaatttcagatgtgatatctgcaaatgcatctgtt
caacccggtcatgttgatgttagtccaatggaacagggaaatgtccagactcataatgtt
cctgcttctgacgattctcccgaagtggatttctgtgaaaaagactcatcaagcaatttg
gatcctagctgtatctcgagtttgaccttgcaagacatggatcatctgaaggtaacagtt
gcgtcatctcttacatgtgatgcaagtcgagaattgtcgagaaagctatccgcatcagca
gcaccattcagtccctccccagccattgcccgtgcagcaccgttacctatgaacattaat
cttccttctcctcctggaacactaccacccgttggcccttggtcaatgaacatctctctt
catcaaggaccaccaactatgttacccaatccaatgtgctcctcccctcatcacctgtac
ccttcacccccgcacaccccaaacatgatgcacccattgcgctttatgtaccctccatat
tctcaaccccagacgatacctccaagtacgttcccgatgagcagcagcaatttccatccg
aatcattatgcttggcaatgcaatatagctcctaatgcatctgagtacgttcctgccaca
gtttggcctggctgccacccagtcgagttttctatatcaccacctgtgattgagcctata
actgactcaatttctgctgctaaggagccatctgataaccctgaaagcattattttggca
acaagcttaccagtagatcttaacactggggatgaagttaaggaagaagtaaatcttcca
gcatcagatacgggggagagcttagctgcggttggatcaaaagagagagcaagcagcact
tcagattcacattttgttacattgtccagtaatcaatcagaagagggtaatggatcaaat
gagaatgctgtgcagagaaatcctacggagactgataaggagaagaccttcaacattttg
gtacggggccggaggaaccgcaaacaaactctaagaatgccgattagtttgctcaagaga
ccatattcctctcagcccttcaaagctgtatatagcagggttataagagagactgaggtt
cccaggtctaccagctttgatccccaggaacatggcatagcgactgctacttga
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