Nicotiana tabacum (common tobacco): 107822142
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Entry
107822142 CDS
T04643
Name
(RefSeq) protein CHROMATIN REMODELING 25-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107822142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nta03400
]
107822142
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
107822142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
AAA_22
DUF7231
Motif
Other DBs
NCBI-GeneID:
107822142
NCBI-ProteinID:
XP_016504130
UniProt:
A0A1S4CSP4
LinkDB
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Position
Un
AA seq
707 aa
AA seq
DB search
MEAEEEALSASERDDSSDEFLCEADDNNDFESNSGDDDHSVESHAGTSSPDEDRKSQNVD
ALVRGNLIVKRQSLLPRVYSVTDAAANLRKPFKPPSSNGYSSTNEHLSRRLCARKRFVPW
GSTRPVLLAITNMLHAPEAAEIDAAEENVELPPGVEPLVLWQPEEIVEEGCNLVPIIVDP
LLVKFLRPHQREGVQFMFDCVSGALSTFNINGCILADDMGLGKTLQSITLLYTLLRQGFD
GKPMVRKAIVVTPTSLVSNWEAEINKWVGERVKLVALCESTRDDVVSGIESFINPLSNLE
VLIVSYETFRMHSSKFSNSGSCDLLICDEAHRLKNDQTLTNRALAALACKRRVLLSGTPM
QNDLEEFYAMVNFTNPGILGDAAHFRRYYEAPIICGREPTAVEEEKKLGSDRSAELSSKV
NQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSDLYNHFIHSKNVKRAITEEAKQSKILA
YITALKKLCNHPKLIYDTIRSGSPGTSGFEDCIRFFPPEMFSGRCGSWTGGAGLWVELSG
KMHVLARLLAQLRQKTDDRIVLVSNYTQTLDLFSRLCRERRYPFLRLDGTISISKRQKLV
NRFNDPTKDEFAFLLSSKAGGCGLNLVGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV
YIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQLDSDIQGNFLSAED
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaggaggaggctctttcggcttcagaacgtgatgattcgagcgatgaattc
ctttgcgaggccgatgataacaacgatttcgaatctaatagcggcgatgatgaccatagt
gtagaatctcacgcaggtaccagttcgcctgatgaagatcgaaaatcgcaaaatgttgat
gctcttgtgaggggtaaccttattgtgaaaagacaatccctacttccacgagtctattca
gtgacagatgcagcagccaatctccgaaagccattcaaacctccaagctccaatggttac
agtagtaccaatgagcatctatcccgtcgtctttgtgctcgtaaaaggtttgtgccatgg
gggtcaacaaggccagtgttgcttgcaattacaaacatgctgcacgctccagaagctgct
gagatagatgcagcggaagaaaatgtagaactgccacctggtgttgaacctttggtgttg
tggcagcctgaagaaattgtggaggaaggctgtaatttagtacctataattgtggatcca
ttgcttgttaagttccttcgtcctcatcaaagggaaggggtccagtttatgtttgactgt
gtctcgggtgcacttagtaccttcaacattaatgggtgcattttagctgatgatatgggt
ttagggaaaactctgcaatcaatcactctactttacactcttcttcgccagggatttgat
ggaaaaccaatggtcaggaaggcaatagttgtgacccctaccagtctcgttagtaattgg
gaggcggaaatcaataagtgggttggagaaagagtaaagcttgttgctttatgtgaaagc
accagagatgatgttgtgtctggcatagaaagttttattaatccacttagtaatttagag
gtcttaattgtttcctacgagacatttcgaatgcattcttcaaaatttagtaattctgga
tcatgtgaccttctcatatgtgatgaggctcacagactgaaaaatgatcaaacgctgact
aatcgagcgttggctgctttagcttgcaagcgccgggttctgctatcagggacaccaatg
caaaatgatctagaagagttttatgctatggttaatttcaccaatcctggtatcttgggc
gatgctgcacactttcggcgttattatgaggcaccaataatttgtggtagggaacccact
gctgtcgaggaagagaagaaattaggatctgaccgctctgctgaattaagttccaaagtt
aatcagtttattttgaggaggacaaatgcgttattgtcaaaccacctaccaccaaagata
atcgaagttgtttgttgcaagttgacacctctccagtcagatctgtacaatcattttata
cattcgaaaaatgtgaaacgagctatcactgaagaagcaaagcaatcaaaaatcttagct
tatataacagctctgaagaagctttgcaatcatccgaagctgatatacgacacaatacga
agtggaagtccagggacatcaggatttgaggactgcatccgctttttccctccagaaatg
ttttctggaaggtgtggctcatggactggcggagctgggttgtgggttgaactgtcaggg
aaaatgcatgtcttagcccggctactggctcaacttcgtcagaaaactgatgataggatt
gttttggtttccaactacacacagacactggaccttttctctcgattatgccgtgaaagg
agatatcccttcttaagacttgatggaactatatcaattagtaaaagacagaagctagtt
aatcgtttcaatgatccaacaaaggatgagtttgcatttctgttgagcagcaaggctgga
ggttgtggtcttaatttggtcggtgggaaccgtctggttttgtttgatcctgattggaat
ccagccaatgacaaacaggctgctgcaagagtctggagagatggacaaaagaaaagggtc
tacatctataggtttttgagtactggaactattgaagaaaaggtgtaccagcgtcagatg
tcaaaggaaggtcttcagaaagttattcagcaggaacaattagattctgatatccaggga
aactttctctcggcagaagac
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